FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14466
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC5293.6568505461081156No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCG5263.6361122632379375No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCT3372.329600442416701No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3032.094566569888013No Hit
ATTGCGCAATGGAGGCGATGGGGCGTTTTGCAGACGCCACCGCCGAGGAA1571.0853034702060003No Hit
ATTGCGCAATGAGTACGGTGGGGCTCTCTTTGCCCCATCTACTGCGAGGA1471.0161758606387392No Hit
ATTGCGCAATGCGACACTGGGGGGTGTGTCGATTGTGCGCAGCGCTCTGA750.5184570717544588No Hit
ATTGCGCAATGCAGCAAACGGGGGCGTGCTCTGTGACCTTTCCCATTCTG740.5115443107977325No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG720.4977187888842804No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAC700.4838932669708282No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTAT700.4838932669708282No Hit
ATTGCGCAATGGAATAATGGGGGTGTCCTACCTGTTTCTGTGCTGGTGGG680.4700677450573759No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC650.4493294621871976No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA650.4493294621871976No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTC560.3871146135766625No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCG550.3802018526199364No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT510.3525508087930319No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT430.297248721139223No Hit
ATTGCGCAATGCATGCCTCGGGCTGGCTGACTCTGCTTGCCAGCTGGAAA420.2903359601824969No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG370.2557721553988663No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT340.23503387252868796No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA330.22812111157196183No Hit
ATTGCGCAATGAATGCCCCGGGGGGTTACTGAATCCAGATAAACTACGAA330.22812111157196183No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC320.22120835061523572No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT300.2073828287017835No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC300.2073828287017835No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCT280.19355730678833125No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACGGTTCTATCG270.18664454583160514No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT220.15208074104797456No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTT210.14516798009124846No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACT210.14516798009124846No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG200.13825521913452232No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT190.13134245817779622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC190.13134245817779622No Hit
ATTGCGCAATGATCGTCGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAG190.13134245817779622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG190.13134245817779622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG190.13134245817779622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC180.1244296972210701No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCA170.11751693626434398No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC160.11060417530761786No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC160.11060417530761786No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG160.11060417530761786No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTAGCG150.10369141435089176No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT150.10369141435089176No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG150.10369141435089176No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)