FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12367
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCG5204.204738416754266No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3973.210156060483545No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCT3933.177811918816204No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2482.0053367833751112No Hit
ATTGCGCAATGGGAACCGCGGGTGACCTGTGTGGAAACAGGGCTTTTTAT1601.2937656666936201No Hit
ATTGCGCAATGGCACTTCCGGGGGGTGAGTCGGGTCCTAAGGCGAGGCCG1311.0592706396054015No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA920.7439152583488315No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG860.6953990458478208No Hit
ATTGCGCAATGGTCACTAGGGGGAAAACAAAATTATACAAACTATAAGGA800.6468828333468101No Hit
ATTGCGCAATGAAGTTCCTGGGATTCGGGCTCCCTGCTGAAAGCCATTTT690.5579364437616237No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC670.5417643729279534No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAT660.5336783375111183No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACC600.4851621250101076No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTG580.46899005417643735No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT520.4204738416754265No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT460.37195762917441577No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA330.26683916875555913No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC330.26683916875555913No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG310.2506670979218889No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT290.23449502708821868No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCGCG270.21832295625454837No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC260.21023692083771325No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC240.19406485000404303No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTAC200.16172070833670252No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT200.16172070833670252No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCG190.1536346729198674No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCTCG180.14554863750303226No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCT180.14554863750303226No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT170.13746260208619712No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC170.13746260208619712No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT170.13746260208619712No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG170.13746260208619712No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACC160.129376566669362No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG160.129376566669362No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC150.1212905312525269No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAGCG150.1212905312525269No Hit
ATTGCGCAATGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCT150.1212905312525269No Hit
ATTGCGCATTGCAGGGCCGGGGGTAGAGCGTCGGATGAATACTCCAGGGG150.1212905312525269No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATT150.1212905312525269No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG150.1212905312525269No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG140.11320449583569175No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT140.11320449583569175No Hit
ATTGCGCAATGGGGACAGCGGGCATCCACGAAACCACCTATAACAGCATC140.11320449583569175No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGGTGCTG130.10511846041885663No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT130.10511846041885663No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)