FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822237

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822237
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12763
Sequences flagged as poor quality0
Sequence length151
%GC59

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC5154.035101465172765No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCG4513.533651962704693No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3052.3897202851994046No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCT2521.9744574159680326No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCG860.6738227689414715No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTAT650.5092846509441353No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAC620.4857792055159445No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA620.4857792055159445No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTC580.45443861161169No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG570.4466034631356264No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG470.36825197837499024No Hit
ATTGCGCAATGAGCTGGCAGGGGAACATGTGGATGCATGGCTATCGCCCT460.3604168298989266No Hit
ATTGCGCAATGGAGAACGCGGGCCAAGTACTTCATTCGGGATGAGTTTCT420.32907623599467206No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC420.32907623599467206No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT340.2663950481861631No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCT320.25072475123403587No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACGGTTCTATCG300.23505445428190866No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT260.20371386037765418No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA260.20371386037765418No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTAGCG240.18804356342552692No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG220.17237326647339968No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCA200.15670296952127244No Hit
ATTGCGCAATGGCCACCAAGGGATCTAAGTACCTGCAGGAAGAGAAAGAA200.15670296952127244No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTT200.15670296952127244No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC200.15670296952127244No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT190.1488678210452088No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATGG180.14103267256914517No Hit
ATTGCGCAATGTTGCGAAGGGGCTGACGAGTCGAGCAGAGACGAAAGTCG180.14103267256914517No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAC180.14103267256914517No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG170.13319752409308155No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC160.12536237561701793No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT150.11752722714095433No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG150.11752722714095433No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACT150.11752722714095433No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT140.1096920786648907No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG140.1096920786648907No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAGTGTTCTATCG140.1096920786648907No Hit
ATTGCGCAATGAGAGGACGGGGGAAGGATGAAAACATCAAGAAAGCTCAG140.1096920786648907No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGGTCTATCG130.10185693018882709No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG130.10185693018882709No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCGCG130.10185693018882709No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)