FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6543
Sequences flagged as poor quality0
Sequence length151
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4226.449640837536299No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2483.7903102552346017No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGAGCGTTATCG951.4519333639003515No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA600.9170105456212746No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGAGCGTTATCT500.7641754546843955No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG420.6419073819348923No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG360.5502063273727648No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC250.38208772734219776No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT240.36680421824850984No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGAGCGTTAT240.36680421824850984No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT200.3056701818737582No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGAGCGT200.3056701818737582No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG190.2903866727800703No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC190.2903866727800703No Hit
ATTGCGCAATGTTACGACGGGGGATGTGATGTATGCATTAAAAATAAAAT190.2903866727800703No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGG180.2751031636863824No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC170.25981965459269446No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCGGAGCGTTATCG160.24453614549900657No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT150.22925263640531865No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT150.22925263640531865No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA140.21396912731163073No Hit
ATTGCGCAATGTCGATCACGGGGGATCACTTGAGCCTAGGAGTACTAGAC130.19868561821794287No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGG120.18340210912425492No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG110.168118600030567No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC110.168118600030567No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC110.168118600030567No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT110.168118600030567No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC110.168118600030567No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG110.168118600030567No Hit
ATTGCGCAATGGTTTACCCGGGGGGTCAAGTGACTAAGTGCATGTGGTGG110.168118600030567No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT100.1528350909368791No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG100.1528350909368791No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGGAGCGGTATCG90.1375515818431912No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCG90.1375515818431912No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT80.12226807274950328No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC80.12226807274950328No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC80.12226807274950328No Hit
ATTGCGCAATGAGCTTACAGGGGGGTCAAGTGAATAAGTGCATATGGTGG80.12226807274950328No Hit
ATTGCGCAAAAAAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAG70.10698456365581537No Hit
ATTGCGCAATGTTATACGTGGGATAAGAAAATATATAGATAGAAAAGAAT70.10698456365581537No Hit
ATTGCGCAATGACGGGTTGGGGATAAGAATAAAAAGAGAAAAAAGAAACT70.10698456365581537No Hit
ATTGCGCAATGACAATGGGGGGAAGTTATTAAGGGCGCACGGTGGATGCC70.10698456365581537No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA70.10698456365581537No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.10698456365581537No Hit
ATTGCGCAATGACATGACAGGGGCCTTTCCGCTCGGCCGTTCTCCTGTAT70.10698456365581537No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)