FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3552
Sequences flagged as poor quality0
Sequence length151
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT105029.56081081081081No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC48013.513513513513514No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC1163.2657657657657655No Hit
GTGTATAAGAGACCGATTGCGCAATCTGTCTCTTATACACATCTGACGCT80.22522522522522523No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT80.22522522522522523No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA70.19707207207207206No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGGAAGTGGTGGGGGT70.19707207207207206No Hit
GTATAAGAGACCGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC70.19707207207207206No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.16891891891891891No Hit
GTGTATAAGAGACAGATTGCGCACTCTGTCTCTTATACACATCTGACGCT60.16891891891891891No Hit
GAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGA50.14076576576576577No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG50.14076576576576577No Hit
ATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCG50.14076576576576577No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC50.14076576576576577No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATATGTA40.11261261261261261No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.11261261261261261No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC40.11261261261261261No Hit
GTGTATAAGAGACAGAGTGCGCAATCTGTCTCTTATACACATCTGACGCT40.11261261261261261No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCC40.11261261261261261No Hit
CATCTGACGCTGCCGACGAGGAAGTGGGGGGGGTGGGGTGGGGGGGGGGG40.11261261261261261No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAA40.11261261261261261No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC40.11261261261261261No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)