FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6901
Sequences flagged as poor quality0
Sequence length151
%GC60

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC5277.636574409505868No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3675.318069844950007No Hit
ATTGCGCAATGTTGCCTTGGGGGAGCCTGGGGGAACAGGTAGGTTAGGCA690.9998550934647153No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCAC600.869439211708448No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCG590.854948558179974No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG460.6665700623098102No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCG370.536154180553543No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA260.3767569917403275No Hit
ATTGCGCAATGGGGGAAGGGGGGCTAAACCTAGCCCCAAACCCACTCCAC220.318794377626431No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCT190.27532241704100857No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC180.2608317635125344No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT160.23185045645558616No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCT160.23185045645558616No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG160.23185045645558616No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAAT140.20286914939863787No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCG120.1738878423416896No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCT110.1593971888132155No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC110.1593971888132155No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA110.1593971888132155No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCT110.1593971888132155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT100.14490653528474134No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA100.14490653528474134No Hit
ATTGCGCAATGTACACGACGGGGGAAAGTCCGACCGTATTGGGTGATAGT90.1304158817562672No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT90.1304158817562672No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTC90.1304158817562672No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAAGCG80.11592522822779308No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC80.11592522822779308No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATGG80.11592522822779308No Hit
ATTGCGCAATGACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCT70.10143457469931894No Hit
ATTGCGCAATGGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCT70.10143457469931894No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTGATACACATCTCCGAGC70.10143457469931894No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG70.10143457469931894No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)