FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822269

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822269
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11081
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCG3232.914899377312517No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2432.1929428751917697No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2292.066600487320639No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1851.669524411154228No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCT1841.6604999548777186No Hit
ATTGCGCAATGTTCGGGAGGGGACGAACTGGGCGAACGTTGAATAAATGA1451.3085461600938544No Hit
ATTGCGCAATGGACTGTGGGGGATAAGCTTCATAGTCGAGAGGGAAACAG1040.9385434527569714No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCAT910.82122552116235No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCG750.6768342207382005No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG600.5414673765905604No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC590.532442920314051No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGA530.4782961826549951No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTAT460.41512498871942966No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT420.3790271636133923No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT360.32488042595433625No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC310.27975814457178955No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT290.26170923201877083No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT290.26170923201877083No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCAGTATCG280.2526847757422615No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG280.2526847757422615No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA260.23463586318924284No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA240.21658695063622416No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG230.20756249435971483No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG230.20756249435971483No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC220.19853803808320547No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT200.1804891255301868No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCT200.1804891255301868No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG190.17146466925367748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC170.1534157567006588No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGAC170.1534157567006588No Hit
ATTGCGCAATGAAAGGTGTGGGCCATTTCAAGCGTGCAGAACTACTTCTC170.1534157567006588No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC160.14439130042414947No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG160.14439130042414947No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC150.1353668441476401No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC150.1353668441476401No Hit
ATTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA140.12634238787113075No Hit
ATTGCGCAATGTCTACCATGGGGTAATAAGACGAAAACACATTATAGTGA140.12634238787113075No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA140.12634238787113075No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTG140.12634238787113075No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT140.12634238787113075No Hit
ATTGCGCAATGAGCAGGCCGGGGTCTCGCTGTGGTGCCCAAAAGAAATAG130.11731793159462142No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT120.10829347531811208No Hit
ATTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG120.10829347531811208No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTAGCG120.10829347531811208No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCA120.10829347531811208No Hit
ATTGCACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCAT120.10829347531811208No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCG120.10829347531811208No Hit
ATTGCGCAATGCGAACTAGGGGGCCGATTAAGCGTTGATCCGAGGATGTC120.10829347531811208No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT120.10829347531811208No Hit
ATTGCGCAATGACATTTGTGGGGAAAAAAAACCCAAACAAATAAAAAAGA120.10829347531811208No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)