FastQCFastQC Report
Tue 7 May 2024
EGAF00007822285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822285
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2476
Total Bases373.8 kbp
Sequences flagged as poor quality0
Sequence length151
%GC62

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1857.47172859450727No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC833.3521809369951536No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG190.7673667205169629No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA190.7673667205169629No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC80.32310177705977383No Hit
ATTGCGCAATCTGTCTCTTATACCTGGCTCTTATACACATCTCCGAGCCC60.24232633279483037No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAAGGACAT50.20193861066235863No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG50.20193861066235863No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAAGGACATCATCG40.16155088852988692No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCAAG40.16155088852988692No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG30.12116316639741519No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTAATACACATCTCCGAGC30.12116316639741519No Hit
GGGCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12116316639741519No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.12116316639741519No Hit
ATTGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.12116316639741519No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC30.12116316639741519No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCGAGCC30.12116316639741519No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC30.12116316639741519No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)