FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3660
Sequences flagged as poor quality0
Sequence length151
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC992.7049180327868854No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC441.2021857923497268No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATCG360.9836065573770493No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA340.9289617486338797No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATCG230.6284153005464481No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGC210.5737704918032787No Hit
ATTGCGCAATGCCGCAAATGGGGGAGAGGGAAACAACCCTGACCAACAGC200.546448087431694No Hit
ATTGCGCAATGACACACTCGGGGAGAAAAAGAAAAAGGGCAGTAGAGCGA150.4098360655737705No Hit
ATTGCGCAATGTAGGAGGGGGGGAGAGGTCTCTGTCCTACTGCTCTCCAG130.3551912568306011No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATCT120.32786885245901637No Hit
ATTGCGCAATGGCCTACTTGGGGTTGCAGTGAGTGGGGACGCACGGCAAG120.32786885245901637No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC110.3005464480874317No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCG90.24590163934426232No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATCT90.24590163934426232No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG90.24590163934426232No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAAT70.1912568306010929No Hit
ATTGCGCAATGTGGGGAGGGGGGAAGAGATGGGGAAGGGAAAAAGGGGAG70.1912568306010929No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG70.1912568306010929No Hit
ATTGCGCAATGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCG60.16393442622950818No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT60.16393442622950818No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA50.1366120218579235No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT50.1366120218579235No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.1366120218579235No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC50.1366120218579235No Hit
ATTGCGCAATGGGATCGGTGGGCGAGCGAACGGGGAGCAGCCCAGAGCCT50.1366120218579235No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAAGCG50.1366120218579235No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC50.1366120218579235No Hit
ATTGCGCAATGACTGCGTGGGGGAGCTCAGCGGCGGCCGCGGCGCGTGCG50.1366120218579235No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC40.1092896174863388No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCACTCG40.1092896174863388No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1092896174863388No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGGC40.1092896174863388No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCG40.1092896174863388No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTT40.1092896174863388No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA40.1092896174863388No Hit
ATTGCGCAATGAGGGGAGGGGGTCGGAGAAGCGGATTGGGTCCTGGGCCT40.1092896174863388No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)