FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1354
Sequences flagged as poor quality0
Sequence length151
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1138.345642540620384No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC352.58493353028065No Hit
ATTGCGCAATGCAAAGTAGGGGCGTGAGTAACCTGCCCTTAACTCTGGGA130.9601181683899557No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG120.8862629246676514No Hit
ATTGCGCAATGGGTGCCACGGGGGGCCCCTCCTTGTCATGTCTGCCGGCA120.8862629246676514No Hit
ATTGCGCAATGAATTCGCAGGGGGGCCCCTCCTTGTCATGTCTGCCGGCA70.51698670605613No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC60.4431314623338257No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTGCGTTAAATCG40.29542097488921715No Hit
ATTGCGCAATGTTCGCGGTGGGCTTCTATTACAAACATAATATTCTCAAA40.29542097488921715No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.29542097488921715No Hit
GCCCGGGGGCCGGGGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.22156573116691286No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTATTATACACATCTCCGAGC30.22156573116691286No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTGATACACATCTCCGAGC30.22156573116691286No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.22156573116691286No Hit
GCGTGCGGGCTGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.14771048744460857No Hit
ATTGCGCAAGCAGAAGACGGCATACGAGATTCTGACTGTGACTGGAGTTC20.14771048744460857RNA PCR Primer, Index 40 (96% over 29bp)
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGTCCACGAGACTCTG20.14771048744460857No Hit
AGATGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAAAAAA20.14771048744460857No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTGTCTTATACACATCTCCGAGC20.14771048744460857No Hit
ATTGCGCAATCTGGCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC20.14771048744460857No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCGTATACACATCTCCGAGC20.14771048744460857No Hit
GCGGGCGGGCAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.14771048744460857No Hit
ATTGCGCAATGGGAATATCGGGGCGGATGTAGACAAAACAAAAAAAAAAA20.14771048744460857No Hit
ATTACGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.14771048744460857No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA20.14771048744460857No Hit
ATTGCGCAATGAGAGACCGGGGGGGCCCGAAAAACAATAAAAAAAACTAG20.14771048744460857No Hit
ATTGCGCAATGGTATCTGGGGGGGGCAGCGGAGGGGAAAAAAAGAAAGGG20.14771048744460857No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGATC20.14771048744460857No Hit
ATTGCGCAATCTGGCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.14771048744460857No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC20.14771048744460857No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTAAACACATCTCCGAGC20.14771048744460857No Hit
GCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.14771048744460857No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTGTTATACACATCTCCGAGC20.14771048744460857No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.14771048744460857No Hit
ATTGCGCAATGGCCAGCTCGGGGGAGCATTAGTGCCCGTTGCATCACCGC20.14771048744460857No Hit
ATTGCGCAATGATTATGGCGGGGGACGTGGGAATCTGCGATAAGCCTGGT20.14771048744460857No Hit
ATTGCGCAATGTCGTCGGAGGGCCGATTAAAAAGAGATAATGAAATGAAA20.14771048744460857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)