FastQCFastQC Report
Tue 7 May 2024
EGAF00007822295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4354
Total Bases657.4 kbp
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2425.558107487367938No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1232.824988516306844No Hit
ATTGCGCAATGGTCGTGGAGGGAAGTTTCCAAGGGCGCATGGTGGATGCC410.9416628387689481No Hit
ATTGCGCAATGCCGATCGCGGGAAGTTTCCAAGGGCGCATGGTGGATGCC320.7349563619660082No Hit
ATTGCGCAATGGTAGCTCGGGGGGGCCCCTCCTTGTCATGTCTGCCGGCA270.6201194304088194No Hit
ATTGCGCAATGAAATAAGCGGGGGTAAATCCGCCGGCTGTATGCCTGAGA240.5512172714745062No Hit
ATTGCGCAATGTTCTGTATGGGGGGATCCTTCACTGACACACTCAGGCTA230.5282498851630685No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA230.5282498851630685No Hit
ATTGCGCAATGACATGGTAGGGGGGCTGGGCATCATGCTCATGCTCGTCA220.5052824988516307No Hit
ATTGCGCAATGGGCCCGTGGGGTAACACATGCAAGTCGAACGATGAAGCC170.39044556729444185No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG160.3674781809830041No Hit
ATTGCGCAATGTCCTGGCTGGGGGCCCATGGCCCCGCTCATCGTCGGCTT130.2985760220486909No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC120.2756086357372531No Hit
ATTGCGCAATGGGCCGGCTGGGGGGCCCCTCCTTGTCATGTCTGCCGGCA110.25264124942581534No Hit
ATTGCGCAATGTCTACGTCGGGAAAAAAAAAGAGCGAGAGCGCCAGCTAT100.22967386311437757No Hit
ATTGCGCAATGGTCACCTCGGGCGGGCCGGTCCGGGACGACCCACGGCCC100.22967386311437757No Hit
ATTGCGCAATGGATCTGGGGGAAGTTTCCAAGGGCGCATGGTGGATGCCT90.20670647680293983No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.18373909049150206No Hit
ATTGCGCAATGCAGTTTCCGGGGGGTCAAGTGAATAAGTGCATATGGTGG80.18373909049150206No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGAGAGAT80.18373909049150206No Hit
ATTGCGCAATGGCAACAACGGGAAGAAAAAAGCTAAAGTCAATAATATTA70.1607717041800643No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG70.1607717041800643No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGA60.13780431786862654No Hit
ATTGCGCAATGCTTGTCCTGGGCGTCCCGGCGCTGGGGGTCATCACTCCG60.13780431786862654No Hit
ATTGCGCAATGGTGGAGGTGGGGCACGAGAACACGTGTTAGGACCCGAAA60.13780431786862654No Hit
ATTGCGCAATGGGAGGGCTGGGGGGCCCCTCCTTGTCATGTCTGCCGGCA50.11483693155718878No Hit
ATTGCGCAATGAGCGTAGGGGGGAAGCCGAAGAAGGACGTTACTAACGAC50.11483693155718878No Hit
ATTGCGCAATGTAAATCACGGGGGCGGGGACGTGTCGCCGAGAATAAAAG50.11483693155718878No Hit
ATTGCGCAATGATTACCCAGGGGGAAAAAACAAAAATAGAAACATCAAAC50.11483693155718878No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)