FastQCFastQC Report
Tue 7 May 2024
EGAF00007822303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4284
Total Bases646.8 kbp
Sequences flagged as poor quality0
Sequence length151
%GC60

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2134.971988795518207No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1002.3342670401493932No Hit
ATTGCGCAATGCCTGATATGGGGATAGTTATATGTATCTAACAGAAAATG461.0737628384687208No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA441.0270774976657329No Hit
ATTGCGCAATGTACGTCGGGGGGTTCCAGGAAATAGCCCCTCCATTATAG250.5835667600373483No Hit
ATTGCGCAATGATCCGGACGGGGAAGAGCTCAAATTTGAAAGCTGGCGTC180.42016806722689076No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG180.42016806722689076No Hit
ATTGCGCAATGGTGGAGCCGGGGGAGTGGCTGGAACTCTTGCTGGAGCCG160.3734827264239029No Hit
ATTGCGCAATGAATTCCAAGGGGGCCTTCCTCGGGCGTTGAACAGTCGAC150.350140056022409No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCG150.350140056022409No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTAC140.32679738562091504No Hit
ATTGCGCAATGGACTCGCTGGGGGGTCAAGCGAACAAGTGCATGTGGTGG130.30345471521942113No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC80.18674136321195145No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA80.18674136321195145No Hit
ATTGCGCAATGGGAGTCGGGGGGTTCCAGGAAATAGCCCCTCCATTATAG80.18674136321195145No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGAT70.16339869281045752No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAA70.16339869281045752No Hit
ATTGCGCAATGAAGCGGACGGGGAAGAGCTCAAATTTGAAAGCTGGCGTC70.16339869281045752No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAA70.16339869281045752No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT60.1400560224089636No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.1400560224089636No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCG60.1400560224089636No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG60.1400560224089636No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC50.11671335200746966No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATGG50.11671335200746966No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC50.11671335200746966No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA50.11671335200746966No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT50.11671335200746966No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)