FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007822309

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822309
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7494
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1792.3885775286896185No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1081.4411529223378703No Hit
ATTGCGCAATGCAGATGCGGGGATGGCAAAGTGGGCTTCCAGAGCTTTCT891.1876167600747265No Hit
ATTGCGCAATGGGACCAGTGGGGGGCCCATAGCTCAGTTGGAAAGAGGGG680.9073925807312517No Hit
ATTGCGCAATGCGATCCCCGGGCGGAGGAGTACCAGGGTGGCTCGTTCAC680.9073925807312517No Hit
ATTGCGCAATGCCGTACGAGGGGCTCTCCGCCAGATCGCCGCCATCATGG580.773952495329597No Hit
ATTGCGCAATGCCAGACAGGGGGGTCCTCAATCGAGTTCCTCTACGAAGA520.6938884440886042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA440.5871363757672805No Hit
ATTGCGCAATGGGAACGCAGGGGAGGAAGTGGCGGTGCGAGGGCTGCTGC380.5070723245262877No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCAT360.4803843074459567No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG330.4403522818254604No Hit
ATTGCGCAATGTACTTCAGGGGAGAAAATGCCGAAGTGCCTCCCCCACCT240.32025620496397117No Hit
ATTGCGCAATGCATTATGGGGGGGATCTTTGCAAAGAAGTCACGGCGCGA190.25353616226314385No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT170.22684814518281293No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG170.22684814518281293No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCG150.20016012810248196No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGA150.20016012810248196No Hit
ATTGCGCAATGGCGGGGTCGGGACGTCGGACGCATGCTATCTTTGGTCGC140.1868161195623165No Hit
ATTGCGCAATGGCCGGGAGGGGGGGCTTTGCCAAGTACAAGTAGTTTCCT140.1868161195623165No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT130.17347211102215104No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC130.17347211102215104No Hit
ATTGCGCAATGGATCCTCAGGGTGCCTCTTTCCGGTTCCCTGAGGGTGGT120.16012810248198558No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG120.16012810248198558No Hit
ATTGCGCAATGTGCCTCTCGGGATGTACAATTTGATATGATGCGATTTAA110.14678409394182013No Hit
ATTGCGCAATGTACGCCCTGGGATGGACTACACGGGCACCGGGAACTCGG110.14678409394182013No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC110.14678409394182013No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG100.13344008540165467No Hit
ATTGCGCAATGAAGAGACCGGGGGGGGTATGGCGCAGTTGGTAGCGCGTC100.13344008540165467No Hit
ATTGCGCAATGTTCGCTGGGGGAGGGCGTCGGCGACGCCGTCCATGGCTC100.13344008540165467No Hit
ATTGCGCAATGTACCCGACGGGGGGATGGGTCTGCGTAAGAGCATATATG90.12009607686148918No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGA90.12009607686148918No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCG90.12009607686148918No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA90.12009607686148918No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT90.12009607686148918No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC80.10675206832132372No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT80.10675206832132372No Hit
ATTGCGCAATGCCACTTCCGGGGGGGGTATAGCGCAGTTGGTAGCGCGTC80.10675206832132372No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)