FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6698
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3915.83756345177665No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2153.20991340698716No Hit
ATTGCGCAATGGACAGTAGGGGGGGTTCAGAACGTCGTGAGACAGTTCGG971.448193490594207No Hit
ATTGCGCAATGAGGGGCGGGGGTTAACTCCATGAGCACTTCTTCAAGCTT951.4183338309943267No Hit
ATTGCGCAATGCTTTCACCGGGTGGGACTGAGACACGGCCCAGACTCCTA901.3436846819946253No Hit
ATTGCGCAATGATTAAACCGGGGGGTTCAGAACGTCGTGAGACAGTTCGG761.1346670647954613No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG400.5971931919976112No Hit
ATTGCGCAATGTGAGCGGGGGGAAGGAACTCGGCAAATTGCCCCCGTAAC390.5822633621976709No Hit
ATTGCGCAATGCTCGGGCGGGGGTACGTCAGATTCGCAACCTGAAAGGAA330.4926843833980293No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA320.477754553598089No Hit
ATTGCGCAATGGGTGAGGGGGGTGTTCATGGGGTGTTCCTTTCAGACAGG230.3433860853986265No Hit
ATTGCGCAATGTAATGCCGGGGGAGGACGTGCGGTTCTATTTTGTTGGTT210.3135264257987459No Hit
ATTGCGCAATGTACCACTGGGGGGCCCAGACTCCTACGGGAGGCAGCAGT190.2836667661988653No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTGCGTTA190.2836667661988653No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCTGCGTTAAATCG180.26873693639892504No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC170.25380710659898476No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTG160.2388772767990445No Hit
ATTGCGCAATGGGACGGCCGGGGTCAACTCGGAGGAAGGTGAGGACGACG140.20901761719916392No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA130.19408778739922367No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTGCGTTAAATCG120.17915795759928338No Hit
ATTGCGCAATGGCAGCGGTGGGGAATATTGCACAATGGGCGAAAGCCTGA120.17915795759928338No Hit
ATTGCGCATGATGGCCTTGGGGAGGTCCTTTCTCGATCCGACGCCCGTGA110.16422812779934307No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA110.16422812779934307No Hit
ATTGCGCAATGTCTGATCTGGGGGGGCCGAACCAGGATCGACGTGTGTTC110.16422812779934307No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTGCGTTAAAT100.1492982979994028No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCTGCGTTAAATCT100.1492982979994028No Hit
ATTGCGCAATGCTTCTACTGGGGGCCCCATCGTATAGCGGCCTAGTACGC100.1492982979994028No Hit
ATTGCGCAATGTGCATCTAGGGGCAACCAACAAAAACATATAAAACCAAC90.13436846819946252No Hit
ATTGCGCAATGGGGGGGCGGAGGAAGCTCATCAGCGGGGCCACGTGCTGA90.13436846819946252No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG90.13436846819946252No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.10450880859958196No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC70.10450880859958196No Hit
ATTGCGCAATGATTTGCCAGGGGGGGGAGAAAGAAAAAAAAAAAAAAAAA70.10450880859958196No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)