FastQCFastQC Report
Tue 7 May 2024
EGAF00007822317

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822317
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19200
Total Bases2.8 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC6913.598958333333333No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCG6593.432291666666667No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCT4822.5104166666666665No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC4692.442708333333333No Hit
ATTGCGCAATGTTCGCTCGGGGTGGGGAATATTGGACAATGGGCGAAAGC3431.7864583333333333No Hit
ATTGCGCAATGTAAAACAGGGGGGTTAAGCGACTAAGCGTACACGGTGGA2981.5520833333333333No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1860.96875No Hit
ATTGCGCAATGGTTGGGGAGGGGGGCCCCTCCTTGTCATGTCTGCCGGCA1830.953125No Hit
ATTGCGCAATGGCTGTGATGGGCTGGGTAGTTTGCTTATTCGTCCATTTC1710.8906249999999999No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTC1160.6041666666666666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG970.5052083333333333No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTAT890.4635416666666667No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC710.3697916666666667No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT610.3177083333333333No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAC540.28125No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT530.2760416666666667No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG510.265625No Hit
ATTGCGCAATGGTATCACAGGGATCCCAACTTAATAATTTACTAATATAA510.265625No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC480.25No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT470.24479166666666669No Hit
ATTGCGCAATGTCGAAAACGGGGGTTCCAGGAAATAGCCCCTCCATTATA460.23958333333333331No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA460.23958333333333331No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACT440.22916666666666666No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC390.203125No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT380.19791666666666669No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCA360.1875No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA330.171875No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG300.15625No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG300.15625No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT290.15104166666666666No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACGGTTCTATCG290.15104166666666666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG290.15104166666666666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT280.14583333333333334No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC280.14583333333333334No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG250.13020833333333331No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCG250.13020833333333331No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC240.125No Hit
ATTGCGCAATGAGGCAGGAGGGACGAGGAGAAAGAAGGAAAGCTGGCAAA230.11979166666666666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT230.11979166666666666No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCGCG230.11979166666666666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTCT220.11458333333333333No Hit
ATTGCGCAATGTCTACGTGGGGCAGGCGATGAAGGACGTGATAGCCTGCG220.11458333333333333No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAC210.10937500000000001No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTT200.10416666666666667No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)