FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13643
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC5624.119328593417871No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCG4873.5695961298834566No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3832.807300447115737No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCT3712.719343252950231No Hit
ATTGCGCAATGCTTGGACGGGGCTGCACTCTTTGTCGCTAGTTTGCTCGG1591.165432822692956No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1401.026167265264238No Hit
ATTGCGCAATGGCAAGGCGGGGAAGACGGTTCGCTTCAACACGCTCAAGG920.6743384886022136No Hit
ATTGCGCAATGAGGCTCAAGGGGTAGCGGAGCGTTCCCTAGGCCGTTGAA910.6670087224217547No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTG760.5570622297148722No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG750.5497324635344133No Hit
ATTGCGCAATGCAGTGGTGGGGAAGTTGTGTAGTGCGATCGGTGGATGCC630.46177526936890717No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACC590.43245620464707174No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAT580.4251264384666129No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG500.36648830902294216No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC500.36648830902294216No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT450.32983947812064796No Hit
ATTGCGCAATGGAACTCCTGGGGTAACACTGAATGGAGGACCGAACCGAC450.32983947812064796No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA380.2785311148574361No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT340.24921205013560066No Hit
ATTGCGCAATGGGAAGGGAGGGGGGACGGCCGGTGTACGCTTAACAACCA340.24921205013560066No Hit
ATTGCGCAATGTCATGCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAG310.22722275159422414No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC300.2198929854137653No Hit
GATTCCGATTTGACGGGCAACCAATCAATGAAACAGACACACCTGCACAG280.2052334530528476No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC270.19790368687238874No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCG270.19790368687238874No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCT260.1905739206919299No Hit
ATTGCGCAATGCTGCTACGGGGGAATAGGACATCGTAGAGGGTGAAAATC250.18324415451147108No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT240.17591438833101225No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG240.17591438833101225No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA230.1685846221505534No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT220.16125485597009456No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAGCG200.14659532360917688No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC200.14659532360917688No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCATCGCG200.14659532360917688No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG200.14659532360917688No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT190.13926555742871805No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC190.13926555742871805No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC180.1319357912482592No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA170.12460602506780033No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTGCAGCT160.1172762588873415No Hit
ATTGCGCAATGAGGGTGGTGAGCATTGTGGAACCCAAAGATGAGATACTG160.1172762588873415No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC160.1172762588873415No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG160.1172762588873415No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCT150.10994649270688266No Hit
ATTGCGCAATGTCTATAGTGGGAAGGCCGAGAAGAAGCACGGCAAGCACC150.10994649270688266No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT140.1026167265264238No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATT140.1026167265264238No Hit
ATTGCGCAAAAAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGA140.1026167265264238No Hit
ATTGCGCAATGTTCAGGGTGGGCATGAAGGGTTGGAGCCTTTTGGATGGG140.1026167265264238No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)