FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822323

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822323
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4017
Sequences flagged as poor quality0
Sequence length151
%GC60

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC711.7674881752551657No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC501.2447099825740602No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCG220.5476723923325865No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA220.5476723923325865No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAA180.4480955937266617No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC140.34851879512073686No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTAC120.2987303958177745No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCG110.27383619616629323No Hit
ATTGCGCAATGTGCAGCACGGGGGGTTTTTTCTTCCTTCAAATTTTGGAC100.24894199651481203No Hit
ATTGCGCAATGTGGTGCCCGGGATGGCCGTTCTTAGTTGGTGGAGTGATT100.24894199651481203No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG100.24894199651481203No Hit
ATTGCGCAATGAGGGAGGGGGGAAAATGAGAAAGGATAAGAAGAAGTGCA90.22404779686333084No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCT90.22404779686333084No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT80.19915359721184964No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCG80.19915359721184964No Hit
ATTGCGCAATGGGTTCCTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAG70.17425939756036843No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.14936519790888725No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA60.14936519790888725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT50.12447099825740601No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGAT50.12447099825740601No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.12447099825740601No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGAGCG50.12447099825740601No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG50.12447099825740601No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAG50.12447099825740601No Hit
ATTGCGCAATGTCTCAGTCGGGGAAGCTCCAGGATGTGTTTGAGATGAGG50.12447099825740601No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)