FastQCFastQC Report
Tue 7 May 2024
EGAF00007822325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3610
Total Bases545.1 kbp
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1534.238227146814404No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC531.4681440443213296No Hit
ATTGCGCAATGGCAGAGTGGGGGGGAAGGCATAGACAGCTAGGAGGTTGG360.9972299168975068No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA290.8033240997229917No Hit
ATTGCGCAATGCCTTCTACGGGGGTTCCAGGAAATAGCCCCTCCATTATA180.4986149584487534No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCTGCAAGTGCATCG170.47091412742382266No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG130.3601108033240997No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC130.3601108033240997No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTGC110.30470914127423826No Hit
ATTGCGCAATGAGATTATCGGGGGGTTCCAGGAAATAGCCCCTCCATTAT100.2770083102493075No Hit
ATTGCGCAATGTTCGAAACGGGGGTGGGGATGACGTCAAGTCCTCATGGC60.16620498614958448No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTGCAAGTGCATCG60.16620498614958448No Hit
ATTGCGCAATGTGAAGGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAG60.16620498614958448No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA60.16620498614958448No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTGCAAGTG50.13850415512465375No Hit
ATTGCGCAATGGTGAAAGGGGGGTGGGGATGACGTCAAGTCCTCATGGCC50.13850415512465375No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTGCAAGTGCAGCG40.110803324099723No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA40.110803324099723No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.110803324099723No Hit
ATTGCGCAATGTATGCTGCTGCTGTCTCTTATACACATCTCCGAGCCCAC40.110803324099723No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCTGCAAGTGCCGCG40.110803324099723No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC40.110803324099723No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)