FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15071
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC5943.941344303629487No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG4252.819985402428505No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC4012.660739167938425No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCT3262.163094685156924No Hit
ATTGCGCAATGCTTCTCCGGGGGTCCTTTCCTTTCAGCGGCGCGCGGCTG2751.8246964368655034No Hit
ATTGCGCAATGGAATCACAGGGGGGCCCCTCCTTGTCATGTCTGCCGGCA1661.1014531218897219No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1370.9090305885475417No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG780.5175502620927609No Hit
ATTGCGCAATGAAAGGGGGGGGGGGATCTAGAAGGAAAAAAGAGAGAAGG760.5042797425519209No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTAT740.49100922301108085No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT690.4578329241589808No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG590.3914803264547807No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGAT580.3848450666843607No Hit
ATTGCGCAATGCAGTCAGTGGGGTTATTGAGGGCGCATGGTGGATGCCTT530.35166876783226064No Hit
ATTGCGCAATGAGCGATCAGGGGGAATTATTGGGCGTAAAGAGCTCGTAG520.34503350806184063No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT510.3383982482914206No Hit
ATTGCGCAATGGGCTTCAGGGGAGTTTCCAAGGGCGCATGGTGGATGCCT510.3383982482914206No Hit
ATTGCGCAATGATATCAGGGGGAACACCGATGGCGAAGGCAGGTCTCTGG510.3383982482914206No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC470.3118572092097406No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT390.25877513104638045No Hit
ATTGCGCAATGCCAGAGACGGGAGGAGAGAGCATGGGTCCCGACCTTGGT380.25213987127596044No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA370.24550461150554043No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC360.23886935173512042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT310.20569305288302037No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC310.20569305288302037No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATG300.19905779311260036No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT290.19242253334218035No Hit
ATTGCGCAATGAACGGGCTGGGGCTGCATAGAATTCAGAACAAAAAAAAA260.17251675403092032No Hit
ATTGCGCAATGACATAATCGGGGGTCCATGCGAAGTCGTAAGACGATGTA240.15924623449008027No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC220.14597571494924028No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC210.13934045517882027No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG200.13270519540840026No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCGCG200.13270519540840026No Hit
ATTGCGCAATGAAAGGGGGGGGGGATCTAGAAGGAAAAAAGAGAGAAGGC200.13270519540840026No Hit
ATTGCGCAATGAAGCGCGCGGGGGACGTGGGAATCTGCGATAAGCCTGGT180.11943467586756021No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG180.11943467586756021No Hit
ATTGCGCAATGACCGCACAAAAAAAACTGAAAACAACAAAACAAAACAAA180.11943467586756021No Hit
ATTGCGCAATGGGCAAAGGGGGCGGGCGCGATGGCCCGCCGGATCGCGTG180.11943467586756021No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC170.1127994160971402No Hit
ATTGCGCAATGCACCGCCCGGGGGGTCCGGACGACGTCGGCCGCGCAATG170.1127994160971402No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT170.1127994160971402No Hit
ATTGCGCAATGAACGCACCGGGGTTACTAACGACGATATGCTTTGGGTAG160.10616415632672019No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)