FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5571
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3025.4209298151139835No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1713.0694668820678515No Hit
ATTGCGCAATGCGGGCCACGGGGAATGCAGGCATGAGTAGTCTGTGACGG440.7898043439238916No Hit
ATTGCGCAATGCTGGAACGGGGAATGCAGGCATGAGTAGTCTGTGACGGG360.6462035541195477No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG270.48465266558966075No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA240.4308023694130318No Hit
ATTGCGCAATGAAGGGGTCGGGGTATACCAAGGCGCTTGAGAGAAGTCTC210.3769520732364028No Hit
ATTGCGCAATGCAAACTAAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAG210.3769520732364028No Hit
ATTGCGCAATGCCTGACGTGGGCATAAATAAATATTTTGAATAGTTTAAA160.28720157960868786No Hit
ATTGCGCAATGGCCGGGCGGGGAAGTTTCCAAGGGCGCATGGTGGATGCC160.28720157960868786No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC150.2692514808831448No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGAGAGAT150.2692514808831448No Hit
ATTGCGCAATGGGCCAGCCGGGAAGGGCGCACGGTGGATGCCTTGGCACT100.1795009872554299No Hit
ATTGCGCAATGTTGCTCGTGGGTCGGATGGGTCTGCGTAAGAGCATATAT90.16155088852988692No Hit
ATTGCGCAATGCAAGTGGGGGGCAAGCTGCGGAGGGACGCAGTGAGGTAG70.12565069107880095No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGA70.12565069107880095No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT70.12565069107880095No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.12565069107880095No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.10770059235325795No Hit
ATTGCGCAATGGTCGACCCGGGAAGGGCGCACGGTGGATGCCTTGGCACT60.10770059235325795No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGAGAGATGAT60.10770059235325795No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA60.10770059235325795No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)