FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007822339

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822339
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24640
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC7583.0762987012987013No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCG6952.820616883116883No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC5872.3823051948051948No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCT5702.313311688311688No Hit
ATTGCGCAATGAGGTCAGGGGGGGTTTGGAAGATGTGGGAGGGGCAAGAT3961.607142857142857No Hit
ATTGCGCAATGTCCGACTCGGGGGGCCCCTCCTTGTCATGTCTGCCGGCA3471.4082792207792207No Hit
ATTGCGCAATGAACTACCGGGGTATCTAATCCTGTTCGCTCCCCATGCTT3301.3392857142857142No Hit
ATTGCGCAATGTCTATACGGGGAAGTTTCCAAGGGCGCATGGTGGATGCC3251.3189935064935063No Hit
ATTGCGCAATGAGCTACCAGGGTATCTAATCCTGTTCGCTCCCCATGCTT3151.278409090909091No Hit
ATTGCGCAATGCTATACTCGGGCGGCGGAGCATGCGGATTAATTCGATGC3101.2581168831168832No Hit
ATTGCGCAATGAGATAACAGGGGGCAGGTCTGCTGCGCAACACGGCCCTG2851.156655844155844No Hit
ATTGCGCAATGCGTATCATGGGGGATCAAGCGACTAAGTGCATACGGTGG2440.9902597402597403No Hit
ATTGCGCAATGAACGGTCCGGGGATGACATCCAGTTCGACAATATTTACA2340.9496753246753247No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1790.726461038961039No Hit
ATTGCGCAATGGTTCATCTGGGAGGACGGCTTGTTCTACAAGCTTCTGTC1760.7142857142857143No Hit
ATTGCGCAATGCGATTTCTGGGGGGAGCCCATGGTTGTGGGTGAGTGAGT1380.560064935064935No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCAC1360.551948051948052No Hit
ATTGCGCAATGTGCGGTGAGGGGTGGCGAAGGCGGCTCACTGGCTCGATA1100.4464285714285714No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG1020.4139610389610389No Hit
ATTGCGCAATGGACAGACCGGGGAAAAGGAGACCGCTTTTGAGTTTCTCT1020.4139610389610389No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCT1010.4099025974025974No Hit
CTTCTTGGACACTTAATGATTGTTGGCAAGAAATGTGCTGCTGATCTGGG1010.4099025974025974No Hit
ATTGCGCAATGAAGCGCACGGGCAAGACTTTTCGTGGTTCATCCATCAAC1000.4058441558441558No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT980.3977272727272727No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAAT870.35308441558441556No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC850.3449675324675325No Hit
ATTGCGCAATGCAGAGCTAGGGAAGTTTCCAAGGGCGCATGGTGGATGCC790.32061688311688313No Hit
ATTGCGCAATGCACTCCATGGGGGGCCCGACAACTTAAAAAAACTTAAAC790.32061688311688313No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT760.30844155844155846No Hit
ATTGCGCAATGTGTTGTACGGGGTTGCCGGAGAGATCCGGGAACACGGAG760.30844155844155846No Hit
ATTGCGCAATGGTTTGTCCGGGGACGTGATTCTAGGGCGCTATCCGCGCC710.28814935064935066No Hit
ATTGCGCAATGGTTTGGGTGGGGAGGTCGAGCGCCCGACGCCCGGCCAGC710.28814935064935066No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG640.2597402597402597No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT600.2435064935064935No Hit
ATTGCGCAATGCGTAAGTGGGGCGGGTCAGGTCCGGTCCGCTTCCGGCGG560.22727272727272727No Hit
ATTGCGCAATGGTGGGCGGATCACAAGGTCAGGAGTTCGAGGTCAGCCTG520.21103896103896103No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG520.21103896103896103No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC520.21103896103896103No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTC510.20698051948051946No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC490.19886363636363635No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAATCG490.19886363636363635No Hit
ATTGCGCAATGGGTGATCCGGGTGAAGATGACAAGGTGTCCATGGATGAC480.19480519480519481No Hit
ATTGCGCAATGCGTCTGAAGGGTGCGTATTAAAAAAATGGTTTGCTACCT430.174512987012987No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT430.174512987012987No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG420.17045454545454544No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT410.16639610389610388No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCTC360.1461038961038961No Hit
ATTGCGCAATGAAGGGGGGGGAAAGTCCGGGCTCCATAGGGCGGAGTGCC360.1461038961038961No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA350.14204545454545456No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC340.137987012987013No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT330.13392857142857142No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC280.11363636363636363No Hit
ATTGCGCAATGAGATCTCGGGGAGGATCCACCGGAGCCGCGACGTGGTCG270.10957792207792207No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTCTCGCACAAGCG260.10551948051948051No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG260.10551948051948051No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT250.10146103896103895No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)