FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6693
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATCG2013.003137606454505No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATCT1652.465262214253698No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1271.8975048558195131No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1121.673390109069177No Hit
ATTGCGCAATGCTCGTTACGCGCGGCAGGACGAAAAGACCCCGGGACCTT921.3745704467353952No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC881.314806514268639No Hit
ATTGCGCAATGGTAAACACGGGGGCATCCGACACTACGCTAAGTTCCTGA851.2699835649185718No Hit
ATTGCGCAATGTGCCACGTGGGATAGGTGGGAGGCTTTGAAGCACTGGCG560.8366950545345885No Hit
ATTGCGCAATGGGCGTAGTGGGAAGTTGTGTAGTGCGATCGGTGGATGCC350.5229344090841177No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGC330.49305244285073957No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAAT320.47811145973405045No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCG270.4034065441506051No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG240.3585835948005379No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC220.32870162856715973No Hit
ATTGCGCAATGACGTAGGGGGGCGGGAGGGAAATGGGAGACAGAAAAAGA180.2689376961004034No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT160.23905572986702522No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC160.23905572986702522No Hit
ATTGCGCAATGGTTACATCGGGGGGCGGGAGGGAAATGGGAGACAGAAAA150.22411474675033619No Hit
ATTGCGCACTGTGAACCGAGGGAGTGAGGTGATTGCTGCTGGGATGGTGG150.22411474675033619No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA150.22411474675033619No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT140.20917376363364712No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCACTCG130.194232780516958No Hit
ATTGCGCAATGGGGCTTGTGGGAAGTTGTGTAGTGCGATCGGTGGATGCC130.194232780516958No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTC130.194232780516958No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG120.17929179740026896No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA120.17929179740026896No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT120.17929179740026896No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCG110.16435081428357987No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA100.14940983116689077No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT100.14940983116689077No Hit
ATTGCGCAATGTCACGGTAGGGTGACGTGGACCGCAAGCAGGGTGGCCTC100.14940983116689077No Hit
ATTGCGCAATGCCTGGACTGGGTATGGGTTTGCTTTTCAATTTTATCAGT100.14940983116689077No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT100.14940983116689077No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG90.1344688480502017No Hit
ATTGCGCAATGGGTGTCGGGGGGCGGGAGGGAAATGGGAGACAGAAAAAG90.1344688480502017No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC90.1344688480502017No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATCG90.1344688480502017No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCACTCT80.11952786493351261No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC80.11952786493351261No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGC80.11952786493351261No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATCGCG80.11952786493351261No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT70.10458688181682356No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC70.10458688181682356No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.10458688181682356No Hit
ATTGCGCAATGGGGCGGGAGGGAAATGGGAGACAGAAAAAGAAAACAAGA70.10458688181682356No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATGG70.10458688181682356No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG70.10458688181682356No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC70.10458688181682356No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT70.10458688181682356No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGC70.10458688181682356No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)