FastQCFastQC Report
Tue 7 May 2024
EGAF00007822363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1723
Total Bases260.1 kbp
Sequences flagged as poor quality0
Sequence length151
%GC67

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1599.22809053975624No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC442.5536854323853744No Hit
ATTGCGCAATGCTGGACAGGGGCCGGATTACCAATCTCAGATAAACTCCG241.3929193267556588No Hit
ATTGCGCAATGCGGGAAGGGGGGTATATGTGTAGTAGGGATGCCGTTTGA181.044689495066744No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG120.6964596633778294No Hit
ATTGCGCAATGATACGCAGGGGCTCAGTAGCTGGAGGAAAAGACATCAAC80.4643064422518862No Hit
ATTGCGCAATGTGTGCTAGGGGTTTGAAGCGAACCCGGGGAACTGAAACA70.4062681369704005No Hit
ATTGCGCAATGTGGCGGGGGGGGATAGGGAGCGATCTCCGAGCGAGGCGG60.3482298316889147No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.3482298316889147No Hit
GGCTGTGGGGTGGGGGGGTCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.2901915264074289No Hit
GGCTGTGGGGTGGGGGGGTCTCCGGGGGGGGGGGGGGGGGGGGGGGGGGG50.2901915264074289No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2321532211259431No Hit
GTGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2321532211259431No Hit
GGGGTCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2321532211259431No Hit
ATTGCGCAATGGAGGGGGGGGATAGGGAGCGATCTCCGAGCGAGGCGGCA40.2321532211259431No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2321532211259431No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAAGGACATCATCG30.17411491584445735No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.17411491584445735No Hit
GCCTTCGGGGTGGGGGGGGTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.17411491584445735No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG30.17411491584445735No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC30.17411491584445735No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAAGGACAT30.17411491584445735No Hit
ATTGCGCAATGATATCCGGGGGAACACCGATGGCGAAGGCAGGTCTCTGG30.17411491584445735No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA30.17411491584445735No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.17411491584445735No Hit
GGGGTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.17411491584445735No Hit
ATTGCGCAAAGCTGGACAGGGGCCGGATTACCAATCTCAGATAAACTCCG20.11607661056297155No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTATCTTATACACATCTCCGAGC20.11607661056297155No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGGCTCTTATACACATCTCCG20.11607661056297155No Hit
ATTGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.11607661056297155No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCGTATACACATCTCCGAGCCC20.11607661056297155No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATATCCGAGC20.11607661056297155No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTGTCTTATACACATCTCCGAGC20.11607661056297155No Hit
ATTGCGCAAAATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.11607661056297155No Hit
GGCTGTGGGGTGGGGGGGGCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
GTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
ATTGCGCAATCTGGCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.11607661056297155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG20.11607661056297155No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC20.11607661056297155No Hit
ATTGCGCAATCTGTCTCTTATACACATCTGTCTCTTATACACATCTCCGA20.11607661056297155No Hit
ATTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
ATTGCGCAATCTGTCGCTTATACCTGTCTCTTATACACATCTCCGAGCCC20.11607661056297155No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
GGGGTAGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
GCCCGGGGGCCGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
GGGCGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
GGGTTTTGGCGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCACCGAGC20.11607661056297155No Hit
GGGCGCTGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
GGGCGCTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
GCGGGGTGGGGGGGGGGGGGATGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit
GGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11607661056297155No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)