FastQCFastQC Report
Tue 7 May 2024
EGAF00007822366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1565
Total Bases236.3 kbp
Sequences flagged as poor quality0
Sequence length151
%GC70

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT19912.715654952076678No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC644.0894568690095845No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGG553.5143769968051117No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC271.7252396166134185No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGGGGGGGGGGGG191.2140575079872205No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTGGGGGGGGGGG171.0862619808306708No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTGGG150.9584664536741214No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGGGGGGGGGGGG150.9584664536741214No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGT150.9584664536741214No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGG110.7028753993610224No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGGGG110.7028753993610224No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100.6389776357827476No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTGGGGGGGGGGG80.5111821086261981No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGGGG70.44728434504792336No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGTGGGGGGGGGGG70.44728434504792336No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGGGGGGGGGGGG70.44728434504792336No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGG70.44728434504792336No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTGGTGGGGGGGGGGG60.38338658146964855No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGGGG60.38338658146964855No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGTGGG50.3194888178913738No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTGGGGGGGGGGG50.3194888178913738No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGGGGG50.3194888178913738No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTGGG50.3194888178913738No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGGGGGGG50.3194888178913738No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTA50.3194888178913738No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTGGGGGG50.3194888178913738No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTG50.3194888178913738No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGGGGG40.25559105431309903No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGGGGGGGGGGGGG40.25559105431309903No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.25559105431309903No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGCGG40.25559105431309903No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGTG40.25559105431309903No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGTGGG40.25559105431309903No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTGGG40.25559105431309903No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGG40.25559105431309903No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGGGGG40.25559105431309903No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAA30.19169329073482427No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGGGGTGGGGGGG30.19169329073482427No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGGGGGGGTGGGG30.19169329073482427No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTGGGTGG30.19169329073482427No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTCGG30.19169329073482427No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTGGGGGGTGGGG30.19169329073482427No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTTGGG30.19169329073482427No Hit
ATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.19169329073482427No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTAGATCTCGG30.19169329073482427Illumina RNA PCR Primer (95% over 21bp)
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGTGGGGGGGGGGG30.19169329073482427No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTG30.19169329073482427No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTGGGG30.19169329073482427No Hit
TCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGGGGGGGGGGGGGG30.19169329073482427No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTCGG30.19169329073482427No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC30.19169329073482427No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGCGGGGGGGGGG30.19169329073482427No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGGGGGGGGGG30.19169329073482427No Hit
GTGTATAAGAGACAGAGTGCGCAATCTGTCTCTTATACACATCTGACGCT30.19169329073482427No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGTAGATCTCGGTGGTCGCC30.19169329073482427Illumina RNA PCR Primer (96% over 29bp)
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTG30.19169329073482427No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTCGGGGGGGGGG30.19169329073482427No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGA20.12779552715654952No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGC20.12779552715654952No Hit
ATCTGTCTCTTATCACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGG20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTGGGTGGGGGGG20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGGGGGGGGTGGGG20.12779552715654952No Hit
ATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCG20.12779552715654952No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGTG20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTTGTGGGGGGGGGGG20.12779552715654952No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAA20.12779552715654952No Hit
CGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.12779552715654952No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGGGTG20.12779552715654952No Hit
GTATAAGAGACAGATTGCGCAATGCTTTCCCCGGGGCAACATTGCGCAAT20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTGGGGGGGGGGC20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGGGGTGGGGGGG20.12779552715654952No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTAGG20.12779552715654952No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGT20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGGGGGGGGGGGGGGG20.12779552715654952No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTGGGTGTG20.12779552715654952No Hit
GTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGGGGGGGGGGGGG20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGTGGGTGGCGGGGGGGGGG20.12779552715654952No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTG20.12779552715654952No Hit
GCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAG20.12779552715654952No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTT20.12779552715654952No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTGGGGGG20.12779552715654952No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGGGTGGG20.12779552715654952No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGAGGGGGGGGGGG20.12779552715654952No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTTGTGGG20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGTGGGGGGGGGGGG20.12779552715654952No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTGCGGGG20.12779552715654952No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGGGGGGG20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGGGGGGGTGGGG20.12779552715654952No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGTGGGGGG20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGGGGGTGGGGGGG20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTGGTGGGGGGTGGGG20.12779552715654952No Hit
GTGTATAAGAGACAGATTGCGCAATCTGGCTCTTATACACATCTGACGCT20.12779552715654952No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTGGGGGGTGGGG20.12779552715654952No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)