FastQCFastQC Report
Tue 7 May 2024
EGAF00007822423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1737
Total Bases262.2 kbp
Sequences flagged as poor quality0
Sequence length151
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1186.793321819228555No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC543.1088082901554404No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG100.5757052389176741No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA100.5757052389176741No Hit
ATTGCGCAATGGATAAACCGGGGCTTCCTTTCTGACCCTTTCCGGGCGTT100.5757052389176741No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC70.40299366724237184No Hit
ATTGCGCAATCTGTCTCTTATACACCTGACTCTTATACACATCTCCGAGC50.28785261945883706No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.28785261945883706No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2302820955670697No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTAC40.2302820955670697No Hit
ATTGCGCTGAGAAGGGACCGTTTTAAATTACCGATTGTACCTCTAGGGCC30.17271157167530224No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCG30.17271157167530224No Hit
ATTGCGCAATGGGATTGGTGGGGTTATTGAGGGCGCATGGTGGATGCCTT30.17271157167530224No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAA30.17271157167530224No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA30.17271157167530224No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAA30.17271157167530224No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.17271157167530224No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11514104778353484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT20.11514104778353484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG20.11514104778353484No Hit
GGCTGTGGGGTGGGGGGGTCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11514104778353484No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCGTATACACATCTCCGAGC20.11514104778353484No Hit
ATTGCGCAATGTCAATGGTGGGCCAGCGCGACACGCTGCGTTCACTGGGC20.11514104778353484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA20.11514104778353484No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA20.11514104778353484No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC20.11514104778353484No Hit
ATTGCGCAATGCCGAGGCCGGGGTGTCAGAAAGTCAATTTCGTCATGACT20.11514104778353484No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.11514104778353484No Hit
GGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11514104778353484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTATGG20.11514104778353484No Hit
ATTGCGCAATCTGGCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.11514104778353484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG20.11514104778353484No Hit
ATTGCGCAATTGCCGCGCAATCTGTCTCTTATACCTGTCTCTTATACACA20.11514104778353484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTTTGGTG20.11514104778353484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG20.11514104778353484No Hit
ATTGCGCAATGTATGCTGCTGTCTCTTATACACATCTCCGAGCCCCGAGA20.11514104778353484No Hit
GGGGTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11514104778353484No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA20.11514104778353484No Hit
ATTGCGCAATGTACATCGTGGGGGGGCTAAAAAAATTTGAAAAAAATAAA20.11514104778353484No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATAAACATCTCCGAGC20.11514104778353484No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCGCTTATACACATCTCCGAGCCC20.11514104778353484No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)