FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1737
Sequences flagged as poor quality0
Sequence length151
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT1548.865860679332183No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC774.4329303396660915No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC211.2089810017271159No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.6332757628094415No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100.5757052389176741No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG90.5181347150259068No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGA70.40299366724237184No Hit
GCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAG70.40299366724237184No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.3454231433506045No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCT50.28785261945883706No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG50.28785261945883706No Hit
AGCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGA40.2302820955670697No Hit
GCAGCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGAC40.2302820955670697No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG40.2302820955670697No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCG40.2302820955670697No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC40.2302820955670697No Hit
ACGTACAACAAAGCATGGTTGCAAACTCGTCTGGGAGTGAAGAAGCACAA40.2302820955670697No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGGTGTTGGGGGGGGGGGGG30.17271157167530224No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGGGTT30.17271157167530224No Hit
CAGCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACG30.17271157167530224No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG30.17271157167530224No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAA30.17271157167530224No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGGTGTTGTGGGGGGGGGGG30.17271157167530224No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCCAAAATTTA30.17271157167530224No Hit
GAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGA30.17271157167530224No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATATT30.17271157167530224No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA30.17271157167530224No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGTGTT30.17271157167530224No Hit
ACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGA30.17271157167530224No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAA20.11514104778353484No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAA20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAAATTTT20.11514104778353484No Hit
CCCCATAACAGGTGCCAGGTTTCCCCATTCGGACATCCTCGGATCAACGC20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAAGTTT20.11514104778353484No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGGGTA20.11514104778353484No Hit
GCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGA20.11514104778353484No Hit
CTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGTGTTTTTGTCGG20.11514104778353484No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG20.11514104778353484No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCGGTGTT20.11514104778353484No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCGGTGTA20.11514104778353484No Hit
CTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGTGTAGATATCGG20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATCTGTGT20.11514104778353484No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGAA20.11514104778353484No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGGGGT20.11514104778353484No Hit
ATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG20.11514104778353484No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA20.11514104778353484No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAAAT20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATATGT20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAAGTGTA20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAAAAATT20.11514104778353484No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGGTGGTGGGGGGGGGGGGC20.11514104778353484No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGTTGTTAGCGGGGGGGGGG20.11514104778353484No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGGGGTTGTGGGGGGGGGGG20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGCAAAATTT20.11514104778353484No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA20.11514104778353484No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAAAA20.11514104778353484No Hit
CCTATATCCCCCGCGTCTTTCTATAAAAGTCCCACGCAATCAGGAAAAGA20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAAATGT20.11514104778353484No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCGGGGGT20.11514104778353484No Hit
GTATAAGAGACAGATTGCGCGGCAATTGCGCAATCTGTCTCTTATACACA20.11514104778353484No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAA20.11514104778353484No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCAAAAT20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAAAGTT20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCAAAATT20.11514104778353484No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCGGGGTT20.11514104778353484No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCA20.11514104778353484No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAA20.11514104778353484No Hit
CTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGTGTAGATCTCGG20.11514104778353484No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGA20.11514104778353484No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCC20.11514104778353484No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCGCTTATACACATCTGACGCT20.11514104778353484No Hit
ATACACATCTGACGCTGCCGACGAGAAGACCGCTGGGGTGGTGGGGGGGG20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAAATTTA20.11514104778353484No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA20.11514104778353484No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGTGTA20.11514104778353484No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGCAATATT20.11514104778353484No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)