FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1209
Sequences flagged as poor quality0
Sequence length151
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC967.94044665012407No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC282.315963606286187No Hit
ATTGCGCAATGATCTGTAAGGGGACTGCGATAGGAATCATGTCTGGTCGC110.9098428453267163No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA90.7444168734491315No Hit
ATTGCGCAATGGGGTAGAAGGGGCTTTCCGGTGTGGAGTCTGGAGACGAC80.6617038875103392No Hit
ATTGCGCAATGTACTAGTGGGGCGAACTGTAGAGTTTGATCCTGGCTCAG80.6617038875103392No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG40.3308519437551696No Hit
ATTGCGCAATGCCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAA30.24813895781637718No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCTGCAAGTGCATCT30.24813895781637718No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.24813895781637718No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.24813895781637718No Hit
GCGTGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT20.1654259718775848No Hit
GCGTGCGGGCTGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
GCCCGCGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
GGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
GGGGTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
GTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
GCGCGGGGGCCGGGGGGGGCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
GGGCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAA20.1654259718775848No Hit
GGGGGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
GGGGGAGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCACTTATACACATCTCCGAGC20.1654259718775848No Hit
GGGCGCGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
GGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit
ATTGCGCAATCTGTCTCTTATACACATCCGGTCTCTTATACACATCTCCG20.1654259718775848No Hit
GCGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1654259718775848No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)