FastQCFastQC Report
Tue 7 May 2024
EGAF00007822426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1209
Total Bases182.5 kbp
Sequences flagged as poor quality0
Sequence length151
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT1169.594706368899917No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC433.556658395368073No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.9098428453267163No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC80.6617038875103392No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG60.49627791563275436No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGGTGTTGTGGGGGGGGGGG40.3308519437551696No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA40.3308519437551696No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA40.3308519437551696No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGGTGTTGGGGGGGGGGGGG30.24813895781637718No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.24813895781637718No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAA30.24813895781637718No Hit
CATCCTGGGCAGCCAACATAGCAGCATATGGTGAGGATTCATCTCGGTCT30.24813895781637718No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGA30.24813895781637718No Hit
CATCTGACGCTGCCGACGAGAAGACCGCTGTGTATATATCGGTGGTCGCC30.24813895781637718No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGAAAAATTT30.24813895781637718No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.24813895781637718No Hit
GCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAG30.24813895781637718No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGTTGTTGTGGGGGGGGGGG30.24813895781637718No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA30.24813895781637718No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCAAAAATTA20.1654259718775848No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATATGTA20.1654259718775848No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCG20.1654259718775848No Hit
CATCTGACGCTGCCGACGAGAAGACCGCTGGGTTGTTGTGGGGGGGGGGG20.1654259718775848No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGGGGGTGTGGGGGGGGGGG20.1654259718775848No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGGGTT20.1654259718775848No Hit
GTATAGGTGACGGCGTCTCGAATAACGTTCTCTAAGAAAACCTTAAGCAC20.1654259718775848No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATATTTAT20.1654259718775848No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG20.1654259718775848No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGCAAAATTT20.1654259718775848No Hit
CATCTGACGCTGCCGACGAGAAGACCGCTGGGTTTTTGGGGGGGGTGGGG20.1654259718775848No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGGTGTTGTGGGGGGGGGGC20.1654259718775848No Hit
ATACACATCTGACGCTGCCGACGAGAAGACCGCTGGGGTGTTGGGGGGGG20.1654259718775848No Hit
TCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAT20.1654259718775848No Hit
CCGTATAGGTGACGGCGTCTCGAATAACGTTCTCTAAGAAAACCTTAAGC20.1654259718775848No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG20.1654259718775848No Hit
CGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.1654259718775848No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCA20.1654259718775848No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.1654259718775848No Hit
GCTACAGATCGTTGGATTGGTGGGCCTTTACCCCACCAACTACCTAATCT20.1654259718775848No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATGTGT20.1654259718775848No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGTTGGTGGGGGGGGGGGGG20.1654259718775848No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGGTGTGGTGGGGGGGGGGG20.1654259718775848No Hit
ATACACATCTGACGCTGCCGACGAGAAGACCGCGGGGTTGTTGTGGGGGG20.1654259718775848No Hit
CATCTGACGCTGCCGACGAGAAGACCGCGGGGTTGGTGTCGGGGGGGGGG20.1654259718775848No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCC20.1654259718775848No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGA20.1654259718775848No Hit
GCCACCTGAGGTCCGAGGCTGATGACCTGTTCTTCCTTCTTTTCCTTCCC20.1654259718775848No Hit
CATCTGACGCTGCCGACGAGAAGACCGCTGTGTTTTTGTGGGGGGGGGGC20.1654259718775848No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGC20.1654259718775848No Hit
ATACACATCTGACGCTGCCGACGAGAAGACCGCGGGGGTGTTGTGGGGGG20.1654259718775848No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG20.1654259718775848No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGCAAA20.1654259718775848No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGAAGACCGCTGTGTT20.1654259718775848No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC20.1654259718775848No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGCAATATG20.1654259718775848No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCAAAAATTT20.1654259718775848No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)