FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1734
Sequences flagged as poor quality0
Sequence length151
%GC65

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1307.497116493656286No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC633.633217993079585No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA120.6920415224913495No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG80.461361014994233No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.40369088811995385No Hit
ATTGCGCAATGATGCAGGTGGGAAGAATACTTGAACCCAGCAGGTCGAGG60.34602076124567477No Hit
ATTGCGCAATGGGGGAAAGAGGAAGAGAATGATATAAGTGGTGAAAAAAA40.2306805074971165No Hit
ATTGCGCAATGGGAAGGTCGGGTGGGTGAGTGAGTGATCCTGTACTGTCG40.2306805074971165No Hit
GCGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2306805074971165No Hit
GGGGTGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.17301038062283738No Hit
ATTGCGCAATCTGTCTCTTATCTGTCTCTTATACACATCTCCGAGCCCAC30.17301038062283738No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.17301038062283738No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTAATACACATCTCCGAGC30.17301038062283738No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG30.17301038062283738No Hit
GCGGGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.17301038062283738No Hit
ATTGCGCAATCTGTCTCTTATACACACTGTCTCTTATACACATCTCCGAG20.11534025374855825No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACAAATCTCCGAGCCC20.11534025374855825No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT20.11534025374855825No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTTTGCCTGTG20.11534025374855825No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11534025374855825No Hit
GCGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11534025374855825No Hit
ATTGCGCAAACTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC20.11534025374855825No Hit
ATTGCGCAAGCAGAAGACGGCATACGAGATTCTGACTGTGACTGGAGTTC20.11534025374855825RNA PCR Primer, Index 40 (96% over 29bp)
ATTGCGCAATCTGTCTCTTATACCTGTCTCGTATACACATCTCCGAGCCC20.11534025374855825No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGTGC20.11534025374855825No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG20.11534025374855825No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA20.11534025374855825No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCAAGGACAT20.11534025374855825No Hit
ATTGCGCAATCTGGCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.11534025374855825No Hit
ATTGCGCAATCTGTCTATTATACACCTGTCTCTTATACACATCTCCGAGC20.11534025374855825No Hit
ATTGCGCAATGGTGTGGCTGGGGGGGCTGATTCTGGATTCGACGGGATTT20.11534025374855825No Hit
ATTGCGCAATGTCGCTCCCGGGTTACCCATTGCGCAATCTGTCTCTTATA20.11534025374855825No Hit
GGGGGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11534025374855825No Hit
GGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11534025374855825No Hit
ATTGCGCAATGCTCACTGGGGGGGATTGGCACACACGAATTGATCCGCAG20.11534025374855825No Hit
ATTGCGCAATGGGTGGCAGGGGGGGCTGATTCTGGATTCGACGGGATTTG20.11534025374855825No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11534025374855825No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT20.11534025374855825No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGGTATGGTGGTG20.11534025374855825No Hit
GGCGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11534025374855825No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC20.11534025374855825No Hit
GGGGGCTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.11534025374855825No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)