FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6111
Sequences flagged as poor quality0
Sequence length151
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCG2333.812796596301751No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1362.2254950090001637No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCT1272.0782196039927996No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA941.5382097856324661No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC851.3909343806251022No Hit
ATTGCGCAATGGGAAGCACGGGGGGTGAGAAACCCGTCCGCCGGATGACT370.6054655539191622No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTAC340.5563737522500409No Hit
ATTGCGCAATGTATCCAATGGGGTGACATGTTAATAGGGAGAGATATTAG300.49091801669121254No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAA300.49091801669121254No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC280.45819014891179843No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG280.45819014891179843No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGAT260.4254622811323842No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC260.4254622811323842No Hit
ATTGCGCAATGCGTAGACGGGGAGAATCAAAATTCAGAAACAGAAAGGGA220.3600065455735559No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCG210.3436426116838488No Hit
ATTGCGCAATGTACAAGAGGGGAAGGGTGTGTTGTTCTACGGTCCGCCAG180.29455081001472755No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA180.29455081001472755No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT140.22909507445589922No Hit
ATTGCGCAATGCAGCAAACGGGGTATACAGAAGGTGAAAAGGACCGGTGT130.2127311405661921No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT120.19636720667648502No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGAGCG110.18000327278677794No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG110.18000327278677794No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG110.18000327278677794No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT110.18000327278677794No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT110.18000327278677794No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC100.16363933889707086No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG100.16363933889707086No Hit
ATTGCGCAATGCAAAAACGGGGTATACAGAAGGTGAAAAGGACCGGTGTA100.16363933889707086No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.16363933889707086No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC90.14727540500736377No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTA90.14727540500736377No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAA90.14727540500736377No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA90.14727540500736377No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC80.13091147111765666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC80.13091147111765666No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATGG80.13091147111765666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG70.11454753722794961No Hit
ATTGCGCAATGTAGTTCGGGGGAAGTCAGGGCGTTTCTGCGCGGCGCGCA70.11454753722794961No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA70.11454753722794961No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG70.11454753722794961No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTACGATCGCG70.11454753722794961No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG70.11454753722794961No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAAGGTCCGATCG70.11454753722794961No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC70.11454753722794961No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)