FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007822473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7641
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3104.057060594163068No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1722.251014265148541No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCG871.138594424813506No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCG730.9553723334642062No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCT390.5104043973301924No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG380.49731710509095667No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTC320.4187933516555425No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAG300.39261876717707106No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCT290.3795314749378354No Hit
ATTGCGCAATGCATCACGGGGGAGACAAAAAAGAAAAAATAGAAAAAAAT270.35335689045936397No Hit
ATTGCGCAATGCTGCACCCGGGGATGTGGCACGTCGTCACTGGGGTGGTG260.34026959822012826No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAAT260.34026959822012826No Hit
ATTGCGCAATGAGTTTGGGGGGATAGCACTGATTTCCATTTCTTTTATTA240.3140950137416569No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG220.28792042926318545No Hit
ATTGCGCAATGATGTATCTGGGGCAACGGACAAAATAGAAATAAACAAGT190.24865855254547833No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA180.23557126030624262No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC160.20939667582777124No Hit
ATTGCGCAATGGCGTGGTGGGGTTGGACTGTCCATCCAGCTGGGGCACTC130.17013479911006413No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA120.15704750687082844No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCG110.14396021463159273No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC110.14396021463159273No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGC110.14396021463159273No Hit
ATTGCGCAATGACGTTACAGGGCAAACAAAAAATAAAATACAAAATAAAA110.14396021463159273No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA110.14396021463159273No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAAGCG100.130872922392357No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA100.130872922392357No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAAGCG90.11778563015312131No Hit
ATCTGTGTCGTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATCG90.11778563015312131No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATGG80.10469833791388562No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC80.10469833791388562No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCAGCTGTCAATGG80.10469833791388562No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT80.10469833791388562No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.10469833791388562No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC80.10469833791388562No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA80.10469833791388562No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC80.10469833791388562No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT80.10469833791388562No Hit
ATTGCGCAATGCCATACGGGGGTGGTAGATACAGCCTCCATACATCTCTT80.10469833791388562No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT80.10469833791388562No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)