FastQCFastQC Report
Tue 7 May 2024
EGAF00007822477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1547
Total Bases233.5 kbp
Sequences flagged as poor quality0
Sequence length151
%GC76

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1388.92049127343245No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC473.038138332255979No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG452.9088558500323205No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG110.7110536522301228No Hit
ATTGCGCAATGTCCGCACTGGGCGCGATAAGGGCGTTTGGTGGATGCCTT100.6464124111182934No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.6464124111182934No Hit
ATTGCGCAATGGACGGCTGGGGCAACCTCCTTGCTGTGATTCCTGGTGGC50.3232062055591467No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.3232062055591467No Hit
ATTGCGCAATGGGATACCTGGGAGAACAAAAGGGTAAAAGTCCCCTTGAT50.3232062055591467No Hit
GGTGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.3232062055591467No Hit
ATTGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC40.25856496444731736No Hit
GGGCGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.19392372333548805No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTGTCTTATACACATCTCCGAGC30.19392372333548805No Hit
ATTGAGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.19392372333548805No Hit
GCCCGCGGGCCGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.19392372333548805No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCGTATACACATCTCCGAGC30.19392372333548805No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTGATACACATCTCCGAGC30.19392372333548805No Hit
GCGTGCGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.19392372333548805No Hit
ATTGCGCAATGGTGGCACGGGGCGCGATAAGGGCGTTTGGTGGATGCCTT30.19392372333548805No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATAAACATCTCCGAGCCC30.19392372333548805No Hit
ATTGCGCAATCTGTCTCTTATACACACTGTCTCTTATACACATCTCCGAG20.12928248222365868No Hit
GCGCGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCCCGAGCC20.12928248222365868No Hit
ATTGCGCAATCTGTCACTTATACACCTGTCTCTTATACACATCTCCGAGC20.12928248222365868No Hit
GGGAGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
GCCTTCGGGGTGGGGGGGGTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCGTATACACATCTCCGAGCCC20.12928248222365868No Hit
GCCCGCGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
GGGGGATGGCGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
GTGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
ATTGCGAAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTAATACACATCTCCGAGC20.12928248222365868No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCATATACACATCTCCGAGC20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACTCATCTCCGAGC20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACCTCTCCGAGC20.12928248222365868No Hit
ATTGCGCAATCTGGCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.12928248222365868No Hit
GGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTAAACACATCTCCGAGC20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACATCTGTCTCTTATACACATCTCCGA20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACCTGACTCTTATACACATCTCCGAGC20.12928248222365868No Hit
GCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATAAACATCTCCGAGC20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTGTTATACACATCTCCGAGC20.12928248222365868No Hit
GGGGGGTGGCGGGGGGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTGATACACATCTCCGAGCCC20.12928248222365868No Hit
GGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC20.12928248222365868No Hit
GCGGGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit
GCGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.12928248222365868No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)