FastQCFastQC Report
Tue 7 May 2024
EGAF00007822495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4233
Total Bases639.1 kbp
Sequences flagged as poor quality0
Sequence length151
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC44610.536262697850225No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1714.039688164422396No Hit
ATTGCGCAATGGAATGAGGGGGCGGGTGAACTGTGGTTAAGGAATTCGGC380.8977084809827545No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG320.7559650366170565No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.23623907394283014No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA100.23623907394283014No Hit
ATTGCGCAATGATCGCGGGGGGGACAAAGCGAGGGCAATCGCGGGAGCCC90.21261516654854712No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACCTATTG80.18899125915426412No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC70.1653673517599811No Hit
ATTGCGCAATGATCGGCACGGGGGGGACAAAGCGAGGGCAATCGCGGGAG70.1653673517599811No Hit
ATTGCGCAATGGTCGGGAGGGGCTACAAAGGGCACATAGTGAATGCCTTG70.1653673517599811No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.14174344436569808No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC60.14174344436569808No Hit
ATTGCGCAATGAGACACGGGGGCTACAAAGGGCACATAGTGAATGCCTTG60.14174344436569808No Hit
ATTGCGCAATGAAGGGGTCGGGACAAGCTATCGGACTGTGTGCTGCCATC60.14174344436569808No Hit
ATTGCGCAATCTGGCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC50.11811953697141507No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACC50.11811953697141507No Hit
ATTGCGCAATGCAGGGGCCGGGACAAGCTATCGGACTGTGTGCTGCCATC50.11811953697141507No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.11811953697141507No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCGTATACACATCTCCGAGC50.11811953697141507No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC50.11811953697141507No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)