FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13017
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCG4663.579933932549743No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCT3362.581239917031574No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3312.542828608742414No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2461.889836367826688No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1951.4980410232772527No Hit
ATTGCGCAATGGATCCCGGGGGCCATTATGGAGCAGGTGAAAGTGCAGAT1561.1984328186218023No Hit
ATTGCGCAATGCTACTCGGGGGGCTGAGGCAGGAGAATTGTTTGAATCTG1130.8680955673350234No Hit
ATTGCGCAATGCACACGCCGGGGCAAGACAGTTACTGATACGGGCAGACA880.6760390258892218No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCAT820.6299454559422294No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG710.5454405777060767No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT680.5223937927325805No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTAT650.49934700775908425No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC580.44557117615425984No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCG580.44557117615425984No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT520.39947760620726747No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC520.39947760620726747No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCAGTATCG440.3380195129446109No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGA440.3380195129446109No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT430.3303372512867788No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC390.29960820465545057No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT380.2919259429976185No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG350.2688791580241223No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA330.2535146347084582No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC320.2458323730506261No Hit
ATTGCGCAATGCCAACCACGGGGTCTTGCCAAAGGACAGTCGCACCCTGT280.21510332641929783No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG260.19973880310363373No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG260.19973880310363373No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA250.19205654144580164No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC210.16132749481447337No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGAC200.15364523315664133No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCG200.15364523315664133No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA190.14596297149880924No Hit
ATTGCGCAATGACAACCCGGGGTAGAAGCCGATGAAGGACGTTACTAACG190.14596297149880924No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG190.14596297149880924No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGA190.14596297149880924No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCA180.13828070984097718No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT180.13828070984097718No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG170.13059844818314512No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTG170.13059844818314512No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG170.13059844818314512No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC160.12291618652531305No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCAGTATCT160.12291618652531305No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTG150.11523392486748099No Hit
ATTGCGCAATGCGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAG150.11523392486748099No Hit
ATTGCGCAATGGCTGCCGGGGGGCTGAGGCAGGAGAATTGTTTGAATCTG150.11523392486748099No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGCTGTCTCTTA150.11523392486748099No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTATCGCG150.11523392486748099No Hit
ATTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA140.10755166320964892No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGCTGTCTCTTAT140.10755166320964892No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTG140.10755166320964892No Hit
ATTGCGCAATGACTGGGTCGGGCCTTGCTGTGACTTGGAGGGGAGACCAC140.10755166320964892No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT140.10755166320964892No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT140.10755166320964892No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT140.10755166320964892No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG140.10755166320964892No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCCT140.10755166320964892No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)