FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822511

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822511
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2693
Sequences flagged as poor quality0
Sequence length151
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC33212.328258447827702No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1445.347196435202377No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG441.6338655774229482No Hit
ATTGCGCAATGACGACAAGGGGAAGGGCGCATGGTGGATGCCTTGGCAAC230.8540660972892685No Hit
ATTGCGCAATGCTTGGAAGGGGCGGCGGACGGGTGAGTAACACGTGGGTA100.37133308577794283No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.25993316004455996No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC70.25993316004455996No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC60.22279985146676567No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.22279985146676567No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTGTCTTATACACATCTCCGAGC50.18566654288897141No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCGTATACACATCTCCGAGC50.18566654288897141No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC50.18566654288897141No Hit
GGGGGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.18566654288897141No Hit
GGGGGCTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.18566654288897141No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.14853323431117713No Hit
GGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.14853323431117713No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.14853323431117713No Hit
ATTGCGCAATCTGTCTCTAATACACCTGTCTCTTATACACATCTCCGAGC40.14853323431117713No Hit
GGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.14853323431117713No Hit
ATTGCGCAATCTGTCTCTTATACCTGGCTCTTATACACATCTCCGAGCCC40.14853323431117713No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA40.14853323431117713No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11139992573338284No Hit
ATTGCGCAAACTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC30.11139992573338284No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTAATACACATCTCCGAGCCC30.11139992573338284No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA30.11139992573338284No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGATCCC30.11139992573338284No Hit
GGGGTATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11139992573338284No Hit
ATTGCGCAAAATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.11139992573338284No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC30.11139992573338284No Hit
ATTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11139992573338284No Hit
GCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.11139992573338284No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCGCTTATACACATCTCCGAGCCC30.11139992573338284No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC30.11139992573338284No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)