FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822533

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822533
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2970
Sequences flagged as poor quality0
Sequence length151
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1785.993265993265993No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC872.9292929292929295No Hit
ATTGCGCAATGGACGCCCCGGGCATTACGAGTAAAGATGCTCGTTACGCG321.0774410774410774No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA311.043771043771044No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG250.8417508417508417No Hit
ATTGCGCAATGCCTATAACGGGGGTTCCAGGAAATAGCCCCTCCATTATA230.7744107744107744No Hit
ATTGCGCAATGAACGCGGGGGGAGCCCAGGAACCGCATTCCGCGTGTGAC190.6397306397306397No Hit
ATTGCGCAATGGAAGCGTGGGGGGTTCCAGGAAATAGCCCCTCCATTATA150.5050505050505051No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.33670033670033667No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC90.30303030303030304No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGAGTC80.26936026936026936No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.26936026936026936No Hit
ATTGCGCAATGGGTATCGGGGGGGAGTCTACGGCTGAAGCGAAACGGGGG70.23569023569023567No Hit
ATTGCGCAATGGACCATCCGGGAAGTGATGGGGTGACGCAGTGAGGTAGC60.20202020202020202No Hit
ATTGCGCAATGCGACGGCCGGGGCACCGGGGTGGATGAGTGGCGAACGGG50.16835016835016833No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC50.16835016835016833No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC50.16835016835016833No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA50.16835016835016833No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGG40.13468013468013468No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC40.13468013468013468No Hit
ATTGCGCAATGGGACTTACGGGGAAGAAGGACGTAAGTGAACGAAAACTA40.13468013468013468No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGAGTCAATCG40.13468013468013468No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTATTATACACATCTCCGAGC30.10101010101010101No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.10101010101010101No Hit
GGGTTTTGGCGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.10101010101010101No Hit
ATTGCGCAATGTGTACACCGGGGAGACAGTTTGGTCCCTATCTGCCGTGG30.10101010101010101No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGAGAGTCAATCT30.10101010101010101No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGA30.10101010101010101No Hit
ATTGCGCAATGGTCTTGCAGGGAGAAAAAAGAAAAAGAAATAAGAAAAAA30.10101010101010101No Hit
GCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.10101010101010101No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCGGT30.10101010101010101No Hit
GGGGGCTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.10101010101010101No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)