FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822534

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822534
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2970
Sequences flagged as poor quality0
Sequence length151
%GC57

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT2428.148148148148149No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC1173.939393939393939No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT391.3131313131313131No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC341.144781144781145No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGG301.0101010101010102No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGT220.7407407407407408No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT170.5723905723905724No Hit
CGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT170.5723905723905724No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG130.4377104377104377No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTT120.40404040404040403No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT120.40404040404040403No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTGGGGGGGGGGG110.3703703703703704No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGGGGGGGGGG110.3703703703703704No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG100.33670033670033667No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGGGGG100.33670033670033667No Hit
GCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAG90.30303030303030304No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC90.30303030303030304No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGC90.30303030303030304No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGG80.26936026936026936No Hit
CCCCTGGCCTGTGCCCCCCACAAATGGTTGCCCAAATGTGGGGCCTCCTT70.23569023569023567No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGTT70.23569023569023567No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG70.23569023569023567No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCG70.23569023569023567No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGGGG70.23569023569023567No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC70.23569023569023567No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGTGGG60.20202020202020202No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGTA60.20202020202020202No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGTGGGGGGGGGGG60.20202020202020202No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGTGGGGGGGGGGG50.16835016835016833No Hit
TCTTGAAGCCGACTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTAC50.16835016835016833No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGC50.16835016835016833No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGGTGTGGG50.16835016835016833No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCA50.16835016835016833No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGTGGGGGGGGGGGGG50.16835016835016833No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGGGGTG40.13468013468013468No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGTGGG40.13468013468013468No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAA40.13468013468013468No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAT40.13468013468013468No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.13468013468013468No Hit
GAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGA40.13468013468013468No Hit
GAATGACCCTACGGCCGGGTTTCCCCATTCGGACATCTCCGGATCAAAGC40.13468013468013468No Hit
GTGTATAAGAGACAGAGTGCGCAATCTGTCTCTTATACACATCTGACGCT40.13468013468013468No Hit
TCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCGCCCT40.13468013468013468No Hit
GTACTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCGCTTTAATGGGC40.13468013468013468No Hit
CCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCTGGGCTTCATTTCGG40.13468013468013468No Hit
TCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG40.13468013468013468No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTA40.13468013468013468No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.13468013468013468No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAAT40.13468013468013468No Hit
GCAGCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGAC40.13468013468013468No Hit
GCCCTATACGTCGTCTTGAAGCCGACTTAGCAGAGCCCTGTGTTTTTGCT40.13468013468013468No Hit
TACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.13468013468013468No Hit
GGCGTCAGGCCCTATACGTCGTCTTGAAGCCGACTTAGCAGAGCCCTGTG30.10101010101010101No Hit
TTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGACT30.10101010101010101No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGA30.10101010101010101No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGGTGTGGG30.10101010101010101No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGTGGGGGGGGGGG30.10101010101010101No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGAAA30.10101010101010101No Hit
CCCTTTAGGAGGCGACCGCCCCAGTCAAACTACCCATCAGGCACTGTCCT30.10101010101010101No Hit
GGATGGGCGATGTGCCCTCGCCGTGCTCGATGCAGTCGATGAGGCTCGCG30.10101010101010101No Hit
GGATGCGACGAGCCGACATCGAGGTGCCAAACCATGCCGTCGCTATGAGC30.10101010101010101No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAAAATGT30.10101010101010101No Hit
TTTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGT30.10101010101010101No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGTG30.10101010101010101No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCC30.10101010101010101No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAAAA30.10101010101010101No Hit
CAATCTGTCTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTG30.10101010101010101No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGC30.10101010101010101No Hit
AACTACCCATCAGGCACTGTCCTTGAACCGGATCACGGTCCACAGTGAGA30.10101010101010101No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCG30.10101010101010101No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCA30.10101010101010101No Hit
CCCTATACGTCGTCTTGAAGCCGACTTAGCAGAGCCCTGTGTTTTTGCTA30.10101010101010101No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGGTGTGGGGGTGTGGG30.10101010101010101No Hit
ATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCG30.10101010101010101No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAA30.10101010101010101No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGAAAA30.10101010101010101No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCAAAATG30.10101010101010101No Hit
GCATACGCATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACG30.10101010101010101No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGTTGGG30.10101010101010101No Hit
CTTAGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCCTGT30.10101010101010101No Hit
CATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTGGGGGGGGGGGGGG30.10101010101010101No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGG30.10101010101010101No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGA30.10101010101010101No Hit
ATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGGGTTGTGGGGGG30.10101010101010101No Hit
CTTCAGGCACCGGGCAGGCGTCAGGCCCTATACGTCGTCTTGAAGCCGAC30.10101010101010101No Hit
CTTATACACATCTGACGCTGCCGACGAGCGTAATGTTGTGGTGTTGGGGG30.10101010101010101No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)