FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4606
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1994.320451584889275No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC891.932262266608771No Hit
ATTGCGCAATGTGATCTAGGGGTAAGTTATCCGCCGAAGCTGTGGCAACC460.998697351280938No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA420.911854103343465No Hit
ATTGCGCAATGGTTTCACTGGGGGTTCCAGGAAATAGCCCCTCCATTATA260.5644811115935736No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG150.3256621797655232No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCAT110.23881893182805036No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG90.19539730785931392No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGA90.19539730785931392No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.17368649587494572No Hit
ATTGCGCAATGGGCTTGAGGGGGCTGTGGATAGGGGTAAAAGGCTAAACA80.17368649587494572No Hit
ATTGCGCAATGGCCTCGACGGGGTTCCAGGAAATAGCCTCCACATTAGAC80.17368649587494572No Hit
ATTGCGCAATGCGGCGCGAGGGCAAAGGACCGAGCGCAAGCATAAGAAGG70.1519756838905775No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA70.1519756838905775No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA60.13026487190620928No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC60.13026487190620928No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA60.13026487190620928No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGACGCATTAT60.13026487190620928No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGA50.10855405992184108No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.10855405992184108No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)