FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822543

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822543
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1170
Sequences flagged as poor quality0
Sequence length151
%GC65

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC413.5042735042735043No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC221.8803418803418803No Hit
ATTGCGCAATGCTATTATCGGGGGTGAATAGGAAAAAGGGGGATGTGGCT80.6837606837606838No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.5128205128205128No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGC60.5128205128205128No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.3418803418803419No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.3418803418803419No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG30.2564102564102564No Hit
ATTGCGCAATGTCGCGTATGGGGGGTCAAGTGAATAAGTGCATATGGTGG30.2564102564102564No Hit
GGGTGGTGGGTGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.17094017094017094No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.17094017094017094No Hit
ATTGCGCAATGAACATCCTGGGGGGTCAAGTGAATAAGTGCATATGGTGG20.17094017094017094No Hit
GGGGTGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.17094017094017094No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.17094017094017094No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAAT20.17094017094017094No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCGCACGCAATCG20.17094017094017094No Hit
GTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.17094017094017094No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA20.17094017094017094No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA20.17094017094017094No Hit
ATTGCGCAATGCTCATGTAGGGGGGTGATAGTCCCGTATACGAAATCCCG20.17094017094017094No Hit
ATTGCGCAATGAAGCCCGAGGGGACTCGAGCGTGAGGAGAGCGGAGCCGG20.17094017094017094No Hit
GGGGGGTGGCGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.17094017094017094No Hit
ATTGCGCAATGTGACACGCGGGATAGTAGAACGGAATGGAAAGTCCGACC20.17094017094017094No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC20.17094017094017094No Hit
GGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.17094017094017094No Hit
ATTGCGCAATGTACGCCGAGGGGAACTTACCAAACCATTGCAAACTCCGA20.17094017094017094No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)