FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822545

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822545
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3110
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATGACCTGGTGGGGGAAGTCTTTGAAGAGGAATCTCTACTTT451.4469453376205788No Hit
ATTGCGCAATGGGGTTAGCGGGGGCGGTGGTTCAAGATGGCGGCGCCCAG120.3858520900321543No Hit
ATTGCGCAATGGGTATGGTGGGGGCGGTGGTTCAAGATGGCGGCGCCCAG60.19292604501607716No Hit
ATTGCGCGCGACCCGGCGGCGGGACAGGCTTGCTGCTTCCTCCTCCTCGG40.12861736334405144No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)