FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3110
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG752.4115755627009645No Hit
GTTCAGTACCATTGGTGGCCAATTGATTTGATGGTAAGGGAGGGATCGTT40.12861736334405144No Hit
GCTCATGAGTGCAAGACGTCTTGTGATGTAATTATTATACGAATGGGGGC40.12861736334405144No Hit
GTGTTATAGGGTAAATACGGGCCCTATTTCAAAGATTTTTAGGGGAATTA40.12861736334405144No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)