FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14609
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4813.292490930248477No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACAGATATATCG3602.4642343760695464No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3552.4300088986241355No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACAGATATATCT2921.998767882811965No Hit
ATTGCGCAATGCAGTGTTCGGGGTAATAGCTCACTAGTCGAGTGCCATTG1691.1568211376548703No Hit
ATTGCGCAATGTCGTCACCGGGGAACTTGGAGATAGCTGGTTCTCTCCGA1511.033609418851393No Hit
ATTGCGCAGTGAGGGTCTCGGGGCGAACTCGGGGAACTGAAACATCTAAG1070.7324252173317818No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA860.5886782120610582No Hit
ATTGCGCAATGCATCTATAGGGTGGAGAGTTTGATCCTGGCTCAGGATGA770.5270723526593196No Hit
ATTGCGCAATGATTAGTTGGGGGAGTATCAATGCTTCGTGCACCCAGGCT740.5065370661920734No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACCGATATATCG710.4860017797248271No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG710.4860017797248271No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC690.47231158874666307No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC680.46546649325758094No Hit
ATTGCGCAATGGGTGCTGAGGGAAAGCCAGCGCCTGTTGGGCAACCACAG650.44493120679033477No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT650.44493120679033477No Hit
ATTGCGCAATGAATTTCCGGGGAGAATGAACCGGCGAGTTACGATCTGAT600.4107057293449244No Hit
ATTGCGCAATGCCTCTCGTGGGCAAGAAGAAGGCAACAGGTGCATACGGC580.39701553836676023No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG580.39701553836676023No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACAGATA580.39701553836676023No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACAGATATAT540.36963515641043193No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACA480.32856458347593953No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT470.32171948798685746No Hit
ATTGCGCAATGGAATAGAGGGGGAGTGGCGGTGACGCAGAAGCTGCGCGA450.3080292970086933No Hit
ATTGCGCAATGGTGGTTCCGGGACTACAAGACGCCGGACGGCAAGCCGCA440.30118420151961117No Hit
ATTGCGCAATGGTCAAGACGGGCCAGGCCCAGGAGGCCACTGAGCAGACT430.2943391060305291No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT410.28064891505236494No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACCGATATATCT390.26695872407420085No Hit
ATTGCGCAATGCTGCACTCGGGGGCGGGAGTAACTATGACTCTCTTAAGG370.2532685330960367No Hit
ATTGCGCAATGTCAAAGGGGGGGATGTCGGCAATGCGGCGCTGGCTGCGG370.2532685330960367No Hit
ATTGCGCAATGAAGGGGAGGGGAGGGACGCCAGGCGAGCCAGGATGGCAC360.24642343760695462No Hit
ATTGCGCAATGGACCAATGGGGCTGAAACAGGTGAAATTAAAGGTCATTA360.24642343760695462No Hit
ATTGCGCAATGTGCCATATGGGGAAGTATAACTGGTCCGTTGCATCATAT350.23957834211787254No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG350.23957834211787254No Hit
ATTGCGCAATGACATAGGAGGGGAGCGAGAGAACTCTCGTTAAGGAACTC340.23273324662879047No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGGAC320.21904305565062632No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT310.21219796016154424No Hit
ATTGCGCAATGTGATGACCGGGCGAGATTCCGAAAGTAGTGGCGAGCGAA310.21219796016154424No Hit
ATTGCGCAATGTGGGGTTGGGGTGGGACGATGGCATGTCGCCACGCCCAC300.2053528646724622No Hit
ATTGCGCAATGGCGTTTTGGGGGGGCGCGATTCGCGCCGCCCATCGAAAG300.2053528646724622No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT290.19850776918338012No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGGACAGATATATCG280.19166267369429804No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG280.19166267369429804No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC270.18481757820521597No Hit
ATTGCGCAATGTATTGGTCGGGACTGCGCTGTGCGCGCATAATGTATTGG250.1711273872270518No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC250.1711273872270518No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC240.16428229173796977No Hit
ATTGCGCAATGGCGGGGACGGGAAGTGTGATTCCGTGAGTAGTGGCGAGC240.16428229173796977No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC230.1574371962488877No Hit
ATTGCGCAATGGTGCTAGTGGGGGTCTCTATCCGCCGCGCGCGTGGAAAC230.1574371962488877No Hit
ATTGCGCAATGCTTCAAAGGGGGGCGCCACCATGGGCACCGGCGAGATCA230.1574371962488877No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC220.15059210075980559No Hit
ATTGCGCAATGGCAGCCTGGGGCGCGCAGCCATCAGGGACCTGGCGGAGA220.15059210075980559No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTG220.15059210075980559No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG220.15059210075980559No Hit
ATTGCGCAATGCGGTGCCGGGGGAGCCTGTTAATGATAGCAGCAGAGATA220.15059210075980559No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT220.15059210075980559No Hit
ATTGCGCAATGTGCATAGGGGGCAAGCTATACACCGAAGCAACGATAATT220.15059210075980559No Hit
ATTGCGCAATGTTGATACAGGGGCGAGCTGGGTTCAGAACGTCGTGAGAC220.15059210075980559No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTG210.1437470052707235No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC210.1437470052707235No Hit
ATTGCGCAATGTATTGTTCGGGGGGGGCCCCTCTCGGGTTACCGAATTCA210.1437470052707235No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA200.13690190978164143No Hit
ATTGCGCAATGGTTACGCCGGGATATAGGGCAGGTAGAGGGAACGCGGGG200.13690190978164143No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGA190.1300568142925594No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGC190.1300568142925594No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT190.1300568142925594No Hit
ATTGCGCAATGGGAGGCCGGGGCGGGCAGATCACGAGGTCAGGAGATCGA190.1300568142925594No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG190.1300568142925594No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTATGCCTGT180.12321171880347731No Hit
ATTGCGCAATGGATCGAACGGGGTTGTAGGGGCGCACGGTGGATGCCTGG180.12321171880347731No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT180.12321171880347731No Hit
ATTGCGCAATGTGGGTAGAGGGTTGCAGGGCTTTGCAGCACTGGCCGCAA180.12321171880347731No Hit
ATTGCGCAATGCATACATAGGGGAGGCATGATGGGGAGCCCACGGTTGTG180.12321171880347731No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT170.11636662331439523No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT170.11636662331439523No Hit
ATTGCGCAATGCAGTGATAGGGAGAGTCAAGTGAATAAGTGCATCAGGTG170.11636662331439523No Hit
ATTGCGCAATGTGGACCCGGGGAAGAACGACGTCAAGAGGAACCTGTAGA160.10952152782531316No Hit
ATTGCGCAATGAGACGGCGGGGAGAGAAGCCGGTATTCGTTTTGTGAAGC160.10952152782531316No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACGGACAGAT160.10952152782531316No Hit
ATTGCGCAATGCGGGTACTGGGGACTGCCAGGACGATTCTAGTCGTGAAG160.10952152782531316No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC160.10952152782531316No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTGA150.1026764323362311No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)