FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15666
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC7154.564024001021321No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCG5773.6831354525724502No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCT4462.846929656581131No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3772.406485382356696No Hit
ATTGCGCAATGTGCTTACTGGGGAGTAGCGTGTGACGGGTGGGAATCCCG1370.8745052980977913No Hit
ATTGCGCAATGGGCGGCGGGGGGACGAGCAAAAGATGCTTACCGAATCCG1150.7340737903740585No Hit
ATTGCGCAATGCGAGTCAGGGGGGGGTTCGATTCCGGAGAGGGAGCCTGA1040.663858036512192No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTC970.6191752840546406No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTAT890.5681092812460105No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA840.5361930294906166No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG680.4340610238733563No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG680.4340610238733563No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAC630.40214477211796246No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT590.3766117707136474No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC590.3766117707136474No Hit
ATTGCGCAATGTTAATAGTGGGGGGATGATGTGGGTGACTTTGCTTCGCT550.3510787693093323No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT540.3446955189582535No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT440.2808630154474659No Hit
ATTGCGCAACGCTGGCCGTGGAAAGCCCAAGACTGTTGAGGAGCTGGATG430.27447976509638705No Hit
ATTGCGCAATGGCATGAATGGGGATCCCATCGATTTGCCATGGCTGAGGG390.24894676369207203No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACT370.23618026298991446No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA320.20426401123452062No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC300.19149751053236308No Hit
ATTGCGCAATGGCATTGGGGGGGGAATTACTGGGCGTAAAGCGCGCGTAG290.18511426018128432No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT290.18511426018128432No Hit
ATTGCGCAATGCCACTGACGGGGGGCGCCGGCGGCTTTGGTGACTCTAGA280.17873100983020554No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG270.17234775947912676No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG260.165964509128048No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC260.165964509128048No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC250.15958125877696924No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCGCG250.15958125877696924No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCACTGTTCTATCG250.15958125877696924No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT240.15319800842589046No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG240.15319800842589046No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT230.14681475807481167No Hit
ATTGCGCAATGAGGCGGCAGGGGGACGAGCAAAAGATGCTTACCGAATCC230.14681475807481167No Hit
ATTGCGCAATGAGACTGCCGGGGTCAACTCGGAGGAAGGTGAGGACGACG220.14043150772373295No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG220.14043150772373295No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCAC210.13404825737265416No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACTGTT210.13404825737265416No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCACGGTTCTATCG200.12766500702157538No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTCT190.12128175667049661No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC190.12128175667049661No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT190.12128175667049661No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT190.12128175667049661No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG170.10851525596833908No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG160.10213200561726031No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC160.10213200561726031No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)