FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10660
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC6015.637898686679174No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC4113.855534709193246No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG3363.1519699812382744No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCT2432.279549718574109No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG610.5722326454033771No Hit
ATTGCGCAATGCGCACCGGGGGGAGGCCATGATTAAGAGGGACGGCCGGG550.5159474671669794No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGAT530.49718574108818014No Hit
ATTGCGCAATGTGATGACCGGGGCATTACGAGTAAAGATGCTCGTTACGC500.46904315196998125No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG480.450281425891182No Hit
ATTGCGCAATGGGTGGGTCAGGGTTGTGACACACCAGCCCAGGTGAGAGC440.41275797373358347No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTAT430.40337711069418386No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA430.40337711069418386No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC410.38461538461538464No Hit
ATTGCGCAATGATTCTGGTGGGGTAGAGAATACTAAGGCGATCGAGAGAA400.37523452157598497No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT390.3658536585365854No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT360.33771106941838647No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT360.33771106941838647No Hit
ATTGCGCAATGTGGGCAGGGGGGCAGCATGTAAATACCACGGACAGTGCT350.3283302063789869No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATG270.2532833020637899No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT250.23452157598499063No Hit
ATTGCGCAATGCTGGTCGAGGGGCGCGAGTGGCGGAATTGGTAGACGCGC240.225140712945591No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA230.2157598499061914No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC200.18761726078799248No Hit
ATTGCGCAATGGGGAGCGCGGGACCTGAACCGGGGAGGCAAGCGCATTAA200.18761726078799248No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCG190.17823639774859287No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT180.16885553470919323No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC170.15947467166979362No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC170.15947467166979362No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTA150.14071294559099437No Hit
ATTGCGCAATGATTTAAGCGGGAAGTTTCCAAGGGCGCATGGTGGATGCC150.14071294559099437No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGA150.14071294559099437No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT150.14071294559099437No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC150.14071294559099437No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC130.12195121951219512No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGAGCG130.12195121951219512No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC120.1125703564727955No Hit
ATTGCGCAATGTTGTACCCGGGGGCCAATCAAACCGGGAAATAGCTGGTT120.1125703564727955No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTATGATCGCG110.10318949343339587No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGTAGGATCG110.10318949343339587No Hit
ATTGCGCAATGTAGTCGGCGGGGCTTTTCGCCGCCGGACGCCGCCGAGGT110.10318949343339587No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC110.10318949343339587No Hit
ATTTTACCTTGTGTCAGAAACGTAACAAATTTACATAAAAGTTTTTAGGA110.10318949343339587No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGGATGATCT110.10318949343339587No Hit
ATTGCGCAATGTCAACCGGGGGCAGAAAAAATAAAAAAACAAAAAAAAAA110.10318949343339587No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)