FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007822571

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822571
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86099
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3150.3658579077573491No Hit
ATTGCGCAATGCACCTCGGGGGTGGTCATGGCTGGCATCATCGCCATCTA2690.3124310386880219No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1290.1498275241292001No Hit
ATTGCGCAATGCCCCAACTAAATACTACCGTATGGCCCACCATAATTACC870.10104646976155357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)