FastQCFastQC Report
Tue 7 May 2024
EGAF00007822583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3281
Total Bases495.4 kbp
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCG1243.7793355684242607No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC993.0173727522096923No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCT912.77354465102103No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC511.5544041450777202No Hit
ATTGCGCAATGTCAGAGTCGGGGCTGACGGCGTCGGACCTGCGGAGCCCA391.1886619932947273No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG300.9143553794574825No Hit
ATTGCGCAATGCAACACCCGGGGGAGCAAACAGGATTAGATACCCTGGTA230.7010057909174032No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA230.7010057909174032No Hit
ATTGCGCAATGGAATGGCAGGGTATACCAAGGCGCTTGAGAGAAGTCTCC200.609570252971655No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC180.5486132276744895No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATG160.48765620237732393No Hit
ATTGCGCAATGCATAACCGGGGGGGGTGTATTTATTAGATAAAAATCAAC150.45717768972874123No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT140.42669917708015853No Hit
ATTGCGCAATGCTAGCGGGGGGGGTGTATTTATTAGATAAAAATCAACAC140.42669917708015853No Hit
ATTGCGCAATGCGATCGCGGGGGGGTTCCAGGAAATAGCCCCTCCATTAT130.3962206644315757No Hit
ATTGCGCAATGTGATCACGGGGGGGTTCCAGGAAATAGCCCCTCCATTAT110.33526363913441026No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGAT110.33526363913441026No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT110.33526363913441026No Hit
ATTGCGCAATGTTCCTAACGGGAGAGGACGGGAGAACATAAACAGGGCGG100.3047851264858275No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAC100.3047851264858275No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAC100.3047851264858275No Hit
ATTGCGCAATGAGGGGACGGATCGGCGGACGGCCGCGTGCCCCTGCGGGG90.27430661383724475No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACT90.27430661383724475No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC80.24382810118866197No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG80.24382810118866197No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT80.24382810118866197No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATGGATCG80.24382810118866197No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA70.21334958854007927No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG70.21334958854007927No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT70.21334958854007927No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC70.21334958854007927No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG60.1828710758914965No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC60.1828710758914965No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCGGCCT60.1828710758914965No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT50.15239256324291375No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGATG50.15239256324291375No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTTA50.15239256324291375No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCAGGAGACCCACTTATGGATCG50.15239256324291375No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATGG40.12191405059433098No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG40.12191405059433098No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGG40.12191405059433098No Hit
ATTGCGCAATGATAGATGGGGGGGGGCTAAACCGTATGTGTGTGATACCC40.12191405059433098No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCT40.12191405059433098No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC40.12191405059433098No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT40.12191405059433098No Hit
ATTGCGCAAAAAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGA40.12191405059433098No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.12191405059433098No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTG40.12191405059433098No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGATCTC40.12191405059433098No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCAGGAGACCCACTTATGGATCT40.12191405059433098No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG40.12191405059433098No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTAT40.12191405059433098No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTGATGGATCT40.12191405059433098No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT40.12191405059433098No Hit
ATTGCGCAATGGGGACCTCGGGGGGACGGATCGGCGGACGGCCGCGTGCC40.12191405059433098No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)