FastQCFastQC Report
Tue 7 May 2024
EGAF00007822585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16337
Total Bases2.4 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATCGCATATCG7814.780559466242272No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATCGCATATCT5553.397196547713779No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4762.91363163371488No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3512.1484972761216867No Hit
ATTGCGCAATGCTCACGCCGGGAGCTAACAAGGGCACACGGAGGATGCCT3502.1423762012609413No Hit
ATTGCGCAATGCATCGATTGGGGGTTCCAGGAAATAGCCCCTCCATTATA1861.1385199240986716No Hit
ATTGCGCAATGTGGAGCCGGGGGGGTTTGCACTAGAAGTGGCTATACCCC1831.1201566995164352No Hit
ATTGCGCAATGAGCCAGGGGGGGAGGAGGAATGCAGGACTGGAAACCCTC1821.1140356246556895No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATCGCA1400.8569504805043766No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG1090.6671971598212646No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATCGCATAT990.6059864112138091No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC770.47132276427740716No Hit
ATTGCGCAATGGCAGCAGGGGGGGTCCCTGCTTACCATTATGACCGAGAC770.47132276427740716No Hit
ATTGCGCAATGCAAAGCCAGGGCAACAAGAGAGACACTCCGTCTCAAATA660.40399094080920617No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT630.38562771622696945No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA580.3550223419232417No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACA570.3489012670624962No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT540.33053804248025953No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACATCGCATATCG490.2999326681765318No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG480.29381159331578627No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC440.2693272938728041No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA400.24484299442982188No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC390.23872191956907635No Hit
ATTGCGCAATGAGCCTACAGGGACAGAATGAAAAAAAAAAAAAAGAGAAA390.23872191956907635No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT370.22647976984758525No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACAT340.20811654526534862No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC310.18975332068311196No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT280.17139009610087533No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATCGCATATCGCG270.16526902124012977No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG270.16526902124012977No Hit
ATTGCGCAATGAGGTGGGTGGGGGGAGAAGGAAACCTACTACTAGCCCAC270.16526902124012977No Hit
ATTGCGCAATGTGGGTAGCGGGGTGGCGGCGACGACCCATTCGAACGTCT260.1591479463793842No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG260.1591479463793842No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTAC250.15302687151863867No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC250.15302687151863867No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG250.15302687151863867No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA240.14690579665789313No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACATCGCATATCT240.14690579665789313No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA230.14078472179714757No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC210.12854257207565647No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT200.12242149721491094No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG190.11630042235416539No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATCGC190.11630042235416539No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT190.11630042235416539No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT180.11017934749341986No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG180.11017934749341986No Hit
ATTGCGCAATGGAGGGCGGGGGACTACACTCCTTGGTAACTGTCACAACT170.10405827263267431No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT170.10405827263267431No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)