FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14059
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC6144.367309196955687No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCG5013.5635535955615616No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCT3372.397041041325841No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2912.069848495625578No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1190.8464328899637243No Hit
ATTGCGCAATGGATGACGTGGGGGTATAGGAAGTAGAATAGGAAGGTGAA910.6472722099722598No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG790.5619176328330606No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCA630.4481115299807952No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGC600.4267728856959955No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC600.4267728856959955No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTAT560.39832135998292906No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT560.39832135998292906No Hit
ATTGCGCAATGAATGCCTGGGGGGTGAAGGAACTAGGCAAAATGGTGCCG540.3840955971263959No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT520.3698698342698627No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT510.36275695284159615No Hit
ATTGCGCAATGCAGAACTCGGGCCGCAGATTTCCGAATGGGGAAACCCGG480.34141830855679633No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG390.27740237570239706No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCAC390.27740237570239706No Hit
ATTGCGCAATGTTATACGGGGGGAGGAATTCAAGAAACTGAAAGCTTTGG370.26317661284586386No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC370.26317661284586386No Hit
ATTGCGCAATAGTACAAAGGGGGGAAATTAAATTAAACACGTAAAAATAT290.20627356141973116No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTC290.20627356141973116No Hit
ATTGCGCAATGGGGCGACCGGGTTTTTTTTTCCTCAGCTGCCGCCAAGGT270.19204779856319795No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT270.19204779856319795No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC270.19204779856319795No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCG260.18493491713493135No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG260.18493491713493135No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC250.17782203570666477No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA250.17782203570666477No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC250.17782203570666477No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT240.17070915427839817No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG210.1493705099935984No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC180.12803186570879863No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCT180.12803186570879863No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCGATCG180.12803186570879863No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG180.12803186570879863No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC170.12091898428053204No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT160.11380610285226546No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCGCG160.11380610285226546No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT160.11380610285226546No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA160.11380610285226546No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT160.11380610285226546No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTAGCG150.10669322142399887No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCA150.10669322142399887No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAG150.10669322142399887No Hit
ATTGCGCAATGGTTATCGTGGGAGATCAAAACCAACCCGGTCAGCCCCTC150.10669322142399887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)