FastQCFastQC Report
Tue 7 May 2024
EGAF00007822603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7745
Total Bases1.1 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4605.939315687540349No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1892.4402840542285342No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCG1692.182052937378954No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCT1281.6526791478373146No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG600.7746933505487411No Hit
ATTGCGCAATGTGACGTGGGGGCGCCGAATCGATGCAAAATCAGGCCAGC540.6972240154938669No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCG420.5422853453841188No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA410.5293737895416398No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGA350.4519044544867657No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC340.4389928986442866No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT330.42608134280180765No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG330.42608134280180765No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT310.40025823111684955No Hit
ATTGCGCAATGAAACACCGGGGAGGGCGCATGGTGGATGCCTTGGCATGC290.37443511943189156No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT290.37443511943189156No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATT250.32278889606197547No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGAT240.3098773402194964No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA220.28405422853453843No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC180.23240800516462234No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT180.23240800516462234No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCT180.23240800516462234No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT180.23240800516462234No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCG160.20658489347966433No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC150.19367333763718528No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC140.18076178179470626No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT130.16785022595222726No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC130.16785022595222726No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC130.16785022595222726No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG130.16785022595222726No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG120.1549386701097482No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT120.1549386701097482No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG110.14202711426726922No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG110.14202711426726922No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG110.14202711426726922No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG110.14202711426726922No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA110.14202711426726922No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGA100.12911555842479017No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA100.12911555842479017No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCT90.11620400258231117No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATGAGGAGATCG90.11620400258231117No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT90.11620400258231117No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA90.11620400258231117No Hit
ATTGCGCAATGCCTGAGCGGGGGAATCAGTGTGTGTGTTAGTGGAAGCGT90.11620400258231117No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC80.10329244673983216No Hit
ATTGCGCAATGACCACGAGGGGAGGGGACTGGAGAGATGGCTCAGTGGTT80.10329244673983216No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCT80.10329244673983216No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA80.10329244673983216No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTG80.10329244673983216No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT80.10329244673983216No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)