FastQCFastQC Report
Wed 8 May 2024
EGAF00007822620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences738226
Total Bases111.4 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15460.20942096322806295No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG7980.10809697843207906No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATTCGATGGTTGTGTA7590.10281404339592481No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)